WormBase Tree Display for Gene: WBGene00226479
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| WBGene00226479 | SMap | S_parent | Sequence | Bm_v4_Chr4_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-rme-1.3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm6218 | ||||||||
| Molecular_name | Bm6218 | ||||||||
| Bm6218.1 | |||||||||
| BM39111 | |||||||||
| Other_name | TAG6218 | Curator_confirmed | WBPerson4055 | ||||||
| Bm1_25220A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_25225A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_25220 | Person_evidence | WBPerson5841 | |||||||
| Bm1_25225 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-rme-1.3 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 24 Mar 2014 11:31:06 | WBPerson4055 | Name_change | CGC_name | Bma-rme-1 | ||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Bma-rme-1 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-rme-1.3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rme | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00221656 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00227582 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00227905 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00228660 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: EH domain-containing protein, N-terminal; EH domain-containing protein 4; Dynamin, N-terminal; EF-hand domain pair; Domain of unknown function DUF5600; Domain of unknown function (DUF5600); N-terminal EH-domain containing protein; EH domain; Dynamin family; P-loop containing nucleoside triphosphate hydrolase; and Cytoskeletal-regulatory complex EF hand. Is an ortholog of C. elegans rme-1. In C. elegans, rme-1 is involved in several processes, including endocytic recycling; lipid tube assembly involved in organelle fission; and necroptotic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm6218 | |||||||
| Corresponding_transcript | Bm6218.1 | ||||||||
| Other_sequence (119) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P1 | |||||||
| WBPaper00045439:BM_Cluster_P5 | |||||||||
| WBPaper00051007:downregulated_F30_vs_L4 | |||||||||
| WBPaper00051007:downregulated_M30_vs_F30 | |||||||||
| WBPaper00051007:upregulated_F120_vs_F30 | |||||||||
| WBPaper00061765:L3_vs_Adult_Downregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| WBPaper00054200 | |||||||||
| Remark | [190208 pad] The CGC name Bma-rme-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-rme-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
