Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00228755

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00228755SMapS_parentSequenceBm_v4_Chr2_contig_001
IdentityVersion16
NameCGC_nameBma-unc-52From_analysisInferred_from_orthology
Sequence_nameBm8494
Molecular_nameBm8494
Bm8494.1
BM40753
Other_name (26)
Public_nameBma-unc-52
SpeciesBrugia malayi
HistoryVersion_change (16)
Acquires_mergeWBGene00221868
WBGene00227607
WBGene00227608
WBGene00227609
WBGene00228299
WBGene00231525
WBGene00231936
WBGene00231977
WBGene00232657
WBGene00234374
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
In_clusterBrugia_malayi_secretome_AFES
Brugia_malayi_secretome_AMES
Brugia_malayi_secretome_MFES
RNASeq_FPKMWBls:0000097126.056From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0.476801From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
1.30482From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
1.38965From_analysisRNASeq.brugia.WBls:0000097.control_median
1.47448From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
169.487From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
2.30704From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
29.175From_analysisRNASeq.brugia.WBls:0000097.control_mean
WBls:0000078160.813From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
175.417From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
4.17671From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
4.66114From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
5.10892From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
73.1336From_analysisRNASeq.brugia.WBls:0000078.control_mean
80.3379From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
81.4205From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
WBls:00000807.78From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
7.91674From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
7.9956From_analysisRNASeq.brugia.WBls:0000080.control_mean
8.00068From_analysisRNASeq.brugia.WBls:0000080.control_median
8.08462From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
8.20105From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
WBls:0000081 (24)
WBls:0000082149.74From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
200.629From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
239.455From_analysisRNASeq.brugia.WBls:0000082.control_mean
267.385From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
286.039From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
293.482From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (82)
WBls:00000926.46615From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
6.70999From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
6.95383From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009435.6858From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
36.0393From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
36.3928From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010135.6858From_analysisRNASeq.brugia.total_over_all_stages.control_median
73.6697From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066216.4585From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
16.8727From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
17.2868From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:00006633.91018From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Ortholog (65)
ParalogWBGene00223188Brugia malayiFrom_analysisWormBase-Compara
WBGene00224046Brugia malayiFrom_analysisWormBase-Compara
WBGene00224249Brugia malayiFrom_analysisWormBase-Compara
WBGene00225164Brugia malayiFrom_analysisWormBase-Compara
WBGene00226169Brugia malayiFrom_analysisWormBase-Compara
WBGene00226424Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by 20-hydroxyecdysone based on proteomic studies. Is predicted to encode a protein with the following domains: Immunoglobulin-like domain superfamily; Immunoglobulin-like domain; Immunoglobulin-like fold; Laminin IV; Laminin-type EGF domain; Immunoglobulin; Immunoglobulin subtype 2; Concanavalin A-like lectin/glucanase domain superfamily; Low-density lipoprotein receptor domain class A; Immunoglobulin domain; EGF-like domain; Laminin EGF domain; Laminin G domain; Low-density lipoprotein (LDL) receptor class A repeat; Immunoglobulin subtype; Laminin B (Domain IV); and LDL receptor-like superfamily. Is an ortholog of C. elegans unc-52. In C. elegans, unc-52 is involved in several processes, including hemidesmosome assembly; muscle cell cellular homeostasis; and muscle structure development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm8494
Corresponding_transcriptBm8494.1
Other_sequence (529)
Experimental_infoExpression_cluster (17)
Reference (2)
Remark[180319 gw3] The CGC name Bma-unc-52 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
[210528 pad] The CGC name Bma-unc-52 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene