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WormBase Tree Display for Gene: WBGene00237999

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Name Class

WBGene00237999SMapS_parentSequenceOVOC_OM1b_21
IdentityVersion2
NameCGC_nameOvo-cle-1From_analysisInferred_from_orthology
Sequence_nameOVOC1190
Molecular_nameOVOC1190
OVOC1190.1
OVP12174
Public_nameOvo-cle-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:31WBPerson4055Name_changeCGC_nameOvo-cle-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcle
RNASeq_FPKMWBls:000010112.1391From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
17.7053From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001074.01387From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010810.12From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
14.1583From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
1.47869From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
8.58566From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:00006640.525159From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
0.616908From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
0.708657From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Ortholog (1681)
Paralog (52)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Collagenase NC10/endostatin; Collagenase NC10 and Endostatin; and C-type lectin fold. Is an ortholog of C. elegans bli-2 and members of the C. elegans dpy and col gene classes including dpy-13 and col-19. In C. elegans, bli-2 is involved in collagen and cuticulin-based cuticle development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC1190
Corresponding_transcriptOVOC1190.1
Other_sequence (64)
MethodGene