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WormBase Tree Display for Gene: WBGene00240803

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Name Class

WBGene00240803SMapS_parentSequenceOVOC_OM2_1
IdentityVersion1
NameSequence_nameOVOC3994
Molecular_nameOVOC3994
OVOC3994.1
OVP04632
Public_nameOVOC3994
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010110.1847From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
7.68977From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:00001074.09894From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010818.7276From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
1.89089From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
22.6831From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
31.6087From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006645.42856From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
6.93964From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
8.45072From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
OrthologWBGene00143869Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153498Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00039108Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042278Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226424Brugia malayiFrom_analysisWormBase-Compara
WBGene00002247Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00125021Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00211653Caenorhabditis japonicaFrom_analysisWormBase-Compara
CSP21.g4786Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9639Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6472Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8045Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24796Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1663Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g3738Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9400Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16935Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5575Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1132Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00015.g1026Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00834.g14478Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06086.g20049Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_23666.g27057Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-lam-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g8964Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold41.g208Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00372.g10329Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11857Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013514Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_026240Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13333Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15719Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40337100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00064034Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068464Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073297Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00098403Pristionchus pacificusFrom_analysisWormBase-Compara
chrIV_pilon.g10367Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00256920Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296107Trichuris murisFrom_analysisWormBase-Compara
WBGene00301698Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237056Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240474Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241569Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242009Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242174Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246876Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Laminin, N-terminal; Laminin-type EGF domain; EGF-like domain; Laminin EGF domain; and Laminin N-terminal (Domain VI). Is an ortholog of C. elegans lam-1. In C. elegans, lam-1 is involved in pharynx development and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3994
Corresponding_transcriptOVOC3994.1
Other_sequence (28)
MethodGene