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WormBase Tree Display for Gene: WBGene00240938

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Name Class

WBGene00240938SMapS_parentSequenceOVOC_OM2_11
IdentityVersion3
NameCGC_nameOvo-hcf-1From_analysisInferred_from_orthology
Sequence_nameOVOC4129
Molecular_nameOVOC4129
OVOC4129.1
OVP09394
Public_nameOvo-hcf-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-hcf-1
309 Mar 2015 14:30:37WBPerson4055EventAcquires_mergeWBGene00240937
Acquires_mergeWBGene00240937
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhcf
RNASeq_FPKMWBls:000010113.4397From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
9.50015From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:00001077.32918From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010821.8048From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
29.0561From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
31.8236From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
4.53461From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066415.2674From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
23.5101From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
31.7528From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (31)
ParalogWBGene00245687Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247179Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247814Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248839Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00255425Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Kelch-type beta propeller; Fibronectin type III; Immunoglobulin-like fold; and Galactose oxidase, central domain. Is an ortholog of C. elegans hcf-1. In C. elegans, hcf-1 is involved in several processes, including dauer exit; determination of adult lifespan; and regulation of DNA-templated transcription.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC4129
Corresponding_transcriptOVOC4129.1
Other_sequence (37)
MethodGene