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WormBase Tree Display for Gene: WBGene00246854

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Name Class

WBGene00246854SMapS_parentSequenceOVOC_OM4_45
IdentityVersion2
NameCGC_nameOvo-del-10From_analysisInferred_from_orthology
Sequence_nameOVOC10045
Molecular_nameOVOC10045
OVOC10045.1
OVP06946
Public_nameOvo-del-10
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-del-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdel
RNASeq_FPKMWBls:000010117.2199From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
6.82545From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:00001076.89486From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001084.53509From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
48.0058From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
49.4677From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
95.8621From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066430.2767From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
56.8551From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
83.4335From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00260796
00260797
00260798
OrthologWBGene00193474Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193948Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00025670Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226332Brugia malayiFrom_analysisWormBase-Compara
WBGene00020897Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00212193Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g7262Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5121Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7578Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g226Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12576Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2135Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g11929Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7414Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19940Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g763Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8541Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_05670.g19760Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-del-10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11565Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00127.g5064Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04552Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08573Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5694Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20278810Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00054087Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00101438Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g4774Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267186Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285168Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00240051Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241086Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247051Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC10045
Corresponding_transcriptOVOC10045.1
Other_sequence (48)
MethodGene