WormBase Tree Display for Gene: WBGene00248105

WBGene00248105 SMap: S_parent: Sequence: OVOC_OM4_121
  Identity: Version: 2
    Name: CGC_name: Ovo-unc-4 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC11296
      Molecular_name: OVOC11296
        OVOC11296.1
        OVP13089
      Public_name: Ovo-unc-4
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:34 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:33 WBPerson4055 Name_change: CGC_name: Ovo-unc-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000101 0.079277 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        1.19486 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 0.045996 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
        0.112558 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        0.152891 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        0.158112 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
        0.201833 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
        0.269088 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        1.50578 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        0 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
      WBls:0000107 2.86841 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 1.56491 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        2.76243 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        3.24169 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        3.48068 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 5.8789 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        6.41894 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        6.95898 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00262064
    Ortholog: WBGene00024297 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00223870 Brugia malayi From_analysis: WormBase-Compara
      WBGene00006744 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00134996 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g12774 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10535 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5091 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7676 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8979 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27016 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11615 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11412 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7820 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2298 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00347.g9545 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FL83_04706 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004835 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08609 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13958 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5402 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20171000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00067190 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00110912 Pristionchus pacificus From_analysis: WormBase-Compara
      chrII_pilon.g5621 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266621 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285201 Trichuris muris From_analysis: WormBase-Compara
      WBGene00285520 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297273 Trichuris muris From_analysis: WormBase-Compara
    Paralog (19)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans unc-4. In C. elegans, unc-4 is involved in several processes, including negative regulation of transcription by RNA polymerase II; nervous system development; and synaptic vesicle transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC11296
    Corresponding_CDS_history: OVOC11296:ov242
    Corresponding_transcript: OVOC11296.1
    Other_sequence (14)
  Method: Gene