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WormBase Tree Display for Gene: WBGene00248829

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Name Class

WBGene00248829SMapS_parentSequenceOVOC_OM5_19
IdentityVersion1
NameSequence_nameOVOC12020
Molecular_nameOVOC12020
OVOC12020.1
OVP11413
OVOC12020.2
Public_nameOVOC12020
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00001017.12898From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
8.2567From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:000010712.3874From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.2726From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
12.1692From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
12.215From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
13.0199From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066412.6482From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
16.9594From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
21.2707From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00262780
OrthologWBGene00041976Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00229024Brugia malayiFrom_analysisWormBase-Compara
WBGene00021304Caenorhabditis elegansFrom_analysisWormBase-Compara
CSP21.g12305Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP40.g8956Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-nphp-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00670.g14229Caenorhabditis sinicaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03382Oscheius tipulaeFrom_analysisWormBase-Compara
chrV_pilon.g13330Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00249114Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in intracellular signal transduction. Is an ortholog of C. elegans nphp-2. In C. elegans, nphp-2 is involved in protein localization to ciliary inversin compartment.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC12020
Corresponding_transcriptOVOC12020.1
OVOC12020.2
Other_sequence (13)
MethodGene