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WormBase Tree Display for Gene: WBGene00259157

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Name Class

WBGene00259157SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000254200
Molecular_nameSRAE_1000254200
SRAE_1000254200.1
SRP01285
Other_nameSR02326Person_evidenceWBPerson2951
SR00973Person_evidenceWBPerson2951
SR03571Person_evidenceWBPerson2951
SR03772Person_evidenceWBPerson2951
Public_nameSRAE_1000254200
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006772.76067From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
2.76927From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
2.79744From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
2.99071From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
3.04989From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
3.20883From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
WBls:00006780.732193From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
0.840899From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
1.0059From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
1.07339From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
1.18572From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
1.2828From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
1.32765From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
1.44777From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
WBls:000068026.2005From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.795345From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00267545
00267546
00267547
00267548
00267549
00267550
00267551
OrthologWBGene00190957Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00225754Brugia malayiFrom_analysisWormBase-Compara
WBGene00208334Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00240556Onchocerca volvulusFrom_analysisWormBase-Compara
Cang_2012_03_13_00571.g12365Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4656Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Pan_g22163Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00286543Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00263078Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266153Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266270Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267812Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of B. malayi Bm5493.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000254200
Corresponding_transcriptSRAE_1000254200.1
Other_sequence (63)
Experimental_infoExpression_clusterWBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene