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WormBase Tree Display for Gene: WBGene00260019

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Name Class

WBGene00260019SMapS_parentSequenceSRAE_chr1
IdentityVersion1
NameSequence_nameSRAE_1000340200
Molecular_nameSRAE_1000340200
SRAE_1000340200.1
SRP12251
Other_nameSR01983Person_evidenceWBPerson2951
Public_nameSRAE_1000340200
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067714.8741From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
15.4897From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
15.5333From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
15.7167From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
15.8701From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
16.0836From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006782.70575From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
3.4877From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
3.87057From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
4.05856From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
4.65139From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
4.87636From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
5.0255From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
5.76422From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:0000680185.582From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006821.2195From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00268745
00268746
00268747
Ortholog (32)
ParalogWBGene00256960Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258122Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260225Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261020Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264968Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266103Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267457Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267482Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00268116Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Is an ortholog of C. elegans unc-25. In C. elegans, unc-25 is involved in GABAergic synaptic transmission.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_1000340200
Corresponding_transcriptSRAE_1000340200.1
Other_sequence (44)
Experimental_infoExpression_clusterWBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene