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WormBase Tree Display for Gene: WBGene00260209

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Name Class

WBGene00260209SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000002000
Molecular_nameSRAE_2000002000
SRAE_2000002000.1
SRP03580
Public_nameSRAE_2000002000
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006771.73994From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
1.78503From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
1.96605From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
1.99425From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
2.03746From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
2.2832From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
WBls:00006780.512139From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
0.608375From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
0.710128From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
0.893708From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
0.943918From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
1.00425From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
1.08352From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
1.25899From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:00006801.73453From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006820.019861From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00268960
00268961
00268962
00268963
OrthologWBGene00227409Brugia malayiFrom_analysisWormBase-Compara
WBGene00241358Onchocerca volvulusFrom_analysisWormBase-Compara
Pan_g127Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00294440Trichuris murisFrom_analysisWormBase-Compara
WBGene00301174Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00257187Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259527Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261226Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262550Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264491Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of B. malayi Bm7148.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000002000
Corresponding_transcriptSRAE_2000002000.1
Other_sequenceOden_isotig20243
Dviv_isotig18139
MH05934
Oden_isotig16694
JI168297.1
Oden_isotig16695
Experimental_infoExpression_clusterWBPaper00050919:down_parasitic_vs_free-living_mRNA
MethodGene