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WormBase Tree Display for Gene: WBGene00270427

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Name Class

WBGene00270427SMapS_parentSequencecb25.fpc0022b
IdentityVersion1
NameSequence_nameCBG30103
Molecular_nameCBG30103
CBG30103.1
CBP44346
Public_nameCBG30103
SpeciesCaenorhabditis briggsae
HistoryVersion_change131 Aug 2016 10:30:13WBPerson4025EventSplit_fromWBGene00024342
Split_fromWBGene00024342
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000215.7187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.6791From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.0634From_analysisRNASeq.briggsae.WBls:0000002.control_mean
31.7925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.5345From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.7358From_analysisRNASeq.briggsae.WBls:0000002.control_median
32.9476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000327.8118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
30.5364From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
33.2609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
32.7405From_analysisRNASeq.briggsae.WBls:0000003.control_mean
37.1487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000412.0835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.6518From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
15.2202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.5774From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
10.7791From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.6822From_analysisRNASeq.briggsae.WBls:0000004.control_mean
9.75065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.766577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.7456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.81149From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
6.77456From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.5644From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.18795From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.22202From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000358.23843From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.2362From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.4597From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.7084From_analysisRNASeq.briggsae.WBls:0000038.control_median
10.9571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
16.0148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.51337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004120.9159From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
46.3368From_analysisRNASeq.briggsae.WBls:0000041.control_mean
54.1278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
54.3671From_analysisRNASeq.briggsae.WBls:0000041.control_median
54.6064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
55.6973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
30.3739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
35.1233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
41.8074From_analysisRNASeq.briggsae.WBls:0000041.control_mean
44.6255From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006315.4807From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.7966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
18.9437From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
22.4058From_analysisRNASeq.briggsae.WBls:0000063.control_mean
28.8639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
29.9441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
21.131From_analysisRNASeq.briggsae.WBls:0000063.control_median
22.5579From_analysisRNASeq.briggsae.WBls:0000063.control_mean
23.3183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.7456From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.8897From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.8802From_analysisRNASeq.briggsae.total_over_all_stages.control_median
20.5102From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (45)
ParalogWBGene00024342Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: DTW and DTW domain. Is an ortholog of C. elegans Y53C12A.10 and Y53C12A.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG30103
Corresponding_transcriptCBG30103.1
Other_sequencePPC13549_1
Acan_isotig19923
Tcol_isotig15256
ES412516.1
Dviv_isotig20146
HBC02731_1
Dviv_isotig20147
Hbac_isotig05248
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00024342_A
GPL8303_CB6_WBGene00024342_B
MethodGene