Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00270742

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00270742SMapS_parentSequencecb25.fpc0023
IdentityVersion4
NameCGC_nameCbr-nhr-56From_analysisInferred_from_orthology
Sequence_nameCBG30688
Molecular_nameCBG30688
CBG30688.1
CBP40398
Public_nameCbr-nhr-56
SpeciesCaenorhabditis briggsae
HistoryVersion_change131 Aug 2016 10:30:13WBPerson4025EventSplit_fromWBGene00024505
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-nhr-56
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCbr-nhr-56
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-nhr-56
Split_fromWBGene00024505
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (16)
RNASeq_FPKMWBls:000000210.9463From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.27297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.94354From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
6.3876From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.81903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.38129From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.74546From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000032.03304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.09857From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.16409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.43976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
1.87896From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000414.905From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
15.6983From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
16.4916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
11.3547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
12.3495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.189From_analysisRNASeq.briggsae.WBls:0000004.control_mean
15.844From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.389151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.2943From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.41901From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.57358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
13.0907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.93394From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.83693From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000354.60249From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.715745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
3.11678From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
5.34532From_analysisRNASeq.briggsae.WBls:0000038.control_mean
5.64355From_analysisRNASeq.briggsae.WBls:0000038.control_median
8.17032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.37843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004111.1866From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.46728From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.06864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.21261From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.35658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
5.01977From_analysisRNASeq.briggsae.WBls:0000041.control_mean
6.09511From_analysisRNASeq.briggsae.WBls:0000041.control_median
6.40916From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.83364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
9.54223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.943187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.51572From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.00544From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
2.10408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.52587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.76867From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.05476From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.03343From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.27297From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.12614From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.21076From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.76224From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00279990
00279991
00279992
00279993
Ortholog (20)
Paralog (220)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-56.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG30688
Corresponding_transcriptCBG30688.1
Remark[190208 pad] The CGC name Cbr-nhr-56 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbr-nhr-56 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene