WormBase Tree Display for Gene: WBGene00271795
expand all nodes | collapse all nodes | view schema
WBGene00271795 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||
Name | Sequence_name | Y46C8AM.1 | |||||
Molecular_name | Y46C8AM.1 | ||||||
Y46C8AM.1.1 | |||||||
CE33872 | |||||||
Y46C8AM.1.2 | |||||||
Y46C8AM.1.3 | |||||||
Other_name | CELE_Y46C8AM.1 | Accession_evidence | NDB | BX284604 | |||
Public_name | Y46C8AM.1 | ||||||
DB_info | Database | NDB | locus_tag | CELE_Y46C8AM.1 | |||
Panther | gene | CAEEL|WormBase=WBGene00271795|UniProtKB=U4PS59 | |||||
family | PTHR23062 | ||||||
NCBI | gene | 34700653 | |||||
RefSeq | protein | NM_001392288.1 | |||||
TrEMBL | UniProtAcc | U4PS59 | |||||
UniProt_GCRP | UniProtAcc | U4PS59 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (52) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | CBOVI.g11167 | Caenorhabditis bovis | From_analysis | WormBase-Compara | |||
CSP21.g9529 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||
CSP31.g19741 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||
CSP32.g15733 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||
CSP38.g4142 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||
Cang_2012_03_13_00447.g10960 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||
chrIV_pilon.g10080 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (38) | |||||||
Structured_description | Automated_description | Is affected by several genes including daf-16; skn-1; and daf-18 based on RNA-seq and microarray studies. Is affected by nitroguanidine based on microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y46C8AM.1 | |||||
Corresponding_transcript | Y46C8AM.1.1 | ||||||
Y46C8AM.1.2 | |||||||
Y46C8AM.1.3 | |||||||
Experimental_info | RNAi_result | WBRNAi00058944 | Inferred_automatically | RNAi_primary | |||
WBRNAi00069445 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056655 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013320 | Inferred_automatically | RNAi_primary | |||||
Microarray_results (13) | |||||||
Expression_cluster (19) | |||||||
Map_info | Positive | Positive_clone | Y46C8AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | -1.28451 | |||||
Method | Gene |