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WormBase Tree Display for Gene: WBGene00273980

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Name Class

WBGene00273980SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameSequence_namePPA35611
Molecular_namePPA35611
PPA35611.1
PP54690
Public_namePPA35611
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.754827From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.26448From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (38)
ParalogWBGene00097765Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cell-cell fusogen EFF/AFF; Cell-cell fusogen EFF/AFF, domain 3; and Type I membrane glycoproteins cell-cell fusogen. Is an ortholog of C. elegans C26D10.7 and eff-1. In C. elegans, eff-1 is involved in several processes, including anatomical structure morphogenesis; egg-laying behavior; and pharyngeal muscle development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA35611
Corresponding_transcriptPPA35611.1
Other_sequenceJI169687.1
Experimental_infoMicroarray_resultsGPL14372_Probes_69311
GPL14372_Probes_69312
GPL14372_Probes_69314
Expression_clusterWBPaper00061743:ppa-eud-1(tu1069)_regulated
WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Down
MethodGene