WormBase Tree Display for Gene: WBGene00277725
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| WBGene00277725 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA39356 | |||||||
| Molecular_name | PPA39356 | ||||||||
| PPA39356.1 | |||||||||
| PP67043 | |||||||||
| Public_name | PPA39356 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 24 Nov 2017 16:14:21 | WBPerson4055 | Event | Created | |||
| 2 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-ccf-1.1 | ||||
| 3 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00283933 | ||||||||
| 00283934 | |||||||||
| 00283935 | |||||||||
| Ortholog (34) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable nucleic acid binding activity and poly(A)-specific ribonuclease activity. Predicted to be part of CCR4-NOT complex. Is an ortholog of C. elegans ccf-1. In C. elegans, ccf-1 is involved in nuclear-transcribed mRNA poly(A) tail shortening and oogenesis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA39356 | |||||||
| Corresponding_transcript | PPA39356.1 | ||||||||
| Remark | [191127 pad] The CGC name Ppa-ccf-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
