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WormBase Tree Display for Gene: WBGene00280690

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Name Class

WBGene00280690SMapS_parentSequencePPA_ChrX
IdentityVersion6
NameCGC_namePpa-ssr-2From_analysisInferred_from_orthology
Sequence_namePPA42321
Molecular_namePPA42321
PPA42321.1
PP55822
Public_namePpa-ssr-2
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-ssr-2
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:22WBPerson1983Name_changeCGC_namePpa-ssr-2
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:27WBPerson1983Name_changeCGC_namePpa-ssr-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classssr
RNASeq_FPKMWBls:000003246.1114From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.3705From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00285860
00285861
Ortholog (27)
ParalogWBGene00090497Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091142Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00092860Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095293Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102177Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113391Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117419Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203549Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277005Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans ssr-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA42321
Corresponding_transcriptPPA42321.1
Other_sequence (11)
Remark[190208 pad] The CGC name Ppa-ssr-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-ssr-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene