WormBase Tree Display for Gene: WBGene00302993

WBGene00302993 SMap: S_parent: Sequence: T14B4
  Identity: Version: 1
    Name: Sequence_name: T14B4.19
      Molecular_name: T14B4.19
        T14B4.19.1
        CE51864
      Other_name: CELE_T14B4.19 Accession_evidence: NDB BX284602
      Public_name: T14B4.19
    DB_info: Database: NDB locus_tag CELE_T14B4.19
        NCBI gene 174106
        RefSeq protein NM_001383870.2
        TrEMBL UniProtAcc A0A1N7SYW9
        UniProt_GCRP UniProtAcc A0A1N7SYW9
    Species: Caenorhabditis elegans
    History: Version_change: 1 06 Mar 2018 14:35:46 WBPerson4025 Event: Split_from: WBGene00001072
      Split_from: WBGene00001072
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (27)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5607
    Ortholog: WBGene00302992 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP32.g18010 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4298 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00375.g9955 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_II.g5170 Caenorhabditis nigoni From_analysis: WormBase-Compara
      chrII_pilon.g4836 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in male-specific anatomical entity based on microarray studies. Is affected by several genes including lin-4; lin-14; and sir-2.1 based on RNA-seq and microarray studies. Is affected by nine chemicals including Atrazine; cadmium; and Quercetin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T14B4.19
    Corresponding_transcript: T14B4.19.1
    Other_sequence (26)
  Experimental_info: RNAi_result (35)
    Microarray_results (14)
    Expression_cluster: WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064403:Heat-killed-E.Coli_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064769:him-17(me24)_downregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065560:E.coli-HB101_downregulated_F3
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065984:pals-17(syb3980)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00066232:ash-2(RNAi)_upregulated_WT
      cgc4489_group_9
      WBPaper00026629:L2_male_enriched
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026952:class_E
      WBPaper00034739:N2lessDR1350
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00040963:TA300_down
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00046083:oga-1(ok1207)_OP50_downregulated
      WBPaper00046083:pmk-1(km25)_OP50_downregulated
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc6390]:Cluster_B
    Interaction (23)
  Map_info: Map: II
    Positive: Positive_clone: T14B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.00849556
  Method: Gene