WormBase Tree Display for Gene: WBGene00304432
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| WBGene00304432 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-pqm-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA46653 | ||||||||
| Molecular_name | PPA46653 | ||||||||
| PPA46653.1 | |||||||||
| PP74436 | |||||||||
| Public_name | Ppa-pqm-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 21 Feb 2019 14:49:04 | WBPerson4055 | Event | Created | |||
| 2 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-pqm-1 | ||||
| 3 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Ppa-pqm-1.1 | ||||
| Other_name | Ppa-pqm-1 | ||||||||
| 4 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-pqm-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqm | ||||||||
| RNASeq_FPKM | WBls:0000032 | 105.82 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 105.82 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 156.252 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 87.3573 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00304946 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Zinc finger C2H2 superfamily and Zinc finger C2H2-type. Is an ortholog of C. elegans pqm-1. In C. elegans, pqm-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule biosynthetic process; and regulation of vitellogenesis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA46653 | |||||||
| Corresponding_transcript | PPA46653.1 | ||||||||
| Other_sequence (40) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_59457 | |||||||
| GPL14372_Probes_59458 | |||||||||
| GPL14372_Probes_84434 | |||||||||
| Expression_cluster | WBPaper00041466:PP_S.marcescens_regulated | ||||||||
| WBPaper00041606:PP_S.marcescens_regulated | |||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [210528 pad] The CGC name Ppa-pqm-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Removed duplicate Other_name Ppa-pqm-1 | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
