WormBase Tree Display for Expression_cluster: WBPaper00027758:Group_I
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| WBPaper00027758:Group_I | Description | Genes downregulated in dpl-1(n3316) and efl-1(n3639) mutants. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | For each set of mutant data, the repeats were averaged, and a Z test [Z=(observedexpected)\/SE] was performed in Excel. A moderate correction for multiple testing (~17,600 genes) was performed by multiplying the calculated P-value by 10,000. After this correction, all genes with up- or downregulation greater than twofold, P<0.05 in any given mutant were selected. The hypergeometric probability test was used to calculate the significance of overlap of gene groups. Authors determined whether transcripts of Group I-IV genes are bound by GLD-1, based on a minimum criteria of >1.5 enrichment in GLD-1 immunoprecipitated samples compared to control immunoprecipitations (P < 0.01). | ||
| Reference | WBPaper00027758 | ||
| Microarray_results | SMD_ZK637.13 | ||
| SMD_W02A2.7 | |||
| SMD_W05F2.3 | |||
| SMD_C36E8.5 | |||
| SMD_C03C10.3 | |||
| SMD_C07G2.1 | |||
| SMD_F01F1.12 | |||
| SMD_R01H2.3 | |||
| SMD_W02F12.3 | |||
| SMD_K03H1.1 | |||
| SMD_T05G5.7 | |||
| SMD_ZC404.8 | |||
| SMD_AH6.5 | |||
| SMD_EEED8.3 | |||
| SMD_B0416.4 | |||
| SMD_R12C12.5 | |||
| SMD_K10B3.8 | |||
| SMD_K10B3.7 | |||
| SMD_F18A1.7 | |||
| SMD_F27C8.6 | |||
| SMD_T09F3.3 | |||
| SMD_W06D11.3 | |||
| SMD_C05C10.5 | |||
| SMD_R05H5.3 | |||
| SMD_C28C12.2 | |||
| SMD_K10B2.3 | |||
| SMD_F31F6.1 | |||
| SMD_F31F6.2 | |||
| SMD_F31F6.3 | |||
| SMD_T12G3.6 | |||
| SMD_B0272.1 | |||
| SMD_F33H1.2 | |||
| SMD_F35C8.7 | |||
| SMD_C07D8.6 | |||
| SMD_ZC513.6 | |||
| SMD_F16H11.3 | |||
| SMD_ZK858.3 | |||
| SMD_T08A9.6 | |||
| SMD_Y43E12A.1 | |||
| SMD_R06C7.4 | |||
| SMD_C17E7.9 | |||
| SMD_T21E3.1 | |||
| SMD_C28D4.3 | |||
| SMD_H02I12.5 | |||
| SMD_C17F4.5 | |||
| SMD_C45H4.14 | |||
| SMD_C50B6.2 | |||
| SMD_F29F11.1 | |||
| SMD_F29G9.7 | |||
| SMD_F54D11.3 | |||
| SMD_K12B6.8 | |||
| SMD_R11A5.4 | |||
| SMD_VF13D12L.1 | |||
| SMD_F40G12.11 | |||
| SMD_C27C12.3 | |||
| SMD_T05F1.2 | |||
| SMD_T06E6.2 | |||
| SMD_T19H12.2 | |||
| SMD_T25E12.5 | |||
| SMD_Y102A5C.18 | |||
| SMD_W03C9.7 | |||
| SMD_Y45F10A.2 | |||
| SMD_T11F8.3 | |||
| SMD_C01G8.1 | |||
| SMD_F26G5.1 | |||
| SMD_F35E12.3 | |||
| SMD_T22F3.3 | |||
| SMD_K04C1.5 | |||
| SMD_T10C6.8 | |||
| SMD_T10C6.7 | |||
| SMD_T11F8.1 | |||
| SMD_T21C9.13 | |||
| SMD_W01A8.1 | |||
| SMD_Y55D5A_392.D | |||
| SMD_ZC308.4 | |||
| Gene (82) | |||
| Attribute_of | Microarray_experiment | WBPaper00027758:efl-1(n3639)_vs_N2_1 | |
| WBPaper00027758:efl-1(n3639)_vs_N2_2 | |||
| WBPaper00027758:efl-1(n3639)_vs_N2_3 | |||
| WBPaper00027758:efl-1(n3639)_vs_N2_4 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_1 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_2 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_3 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_1 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_2 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_3 | |||
| Regulation | Regulated_by_gene | WBGene00001161 | |
| WBGene00001061 | |||
| Associated_with | Life_stage | WBls:0000057 |
