WormBase Tree Display for Expression_cluster: WBPaper00027758:Group_III
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| WBPaper00027758:Group_III | Description | Genes with higher expression in one or more mutants of efl-1, dpl-1 and lin-35 relative to controls. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | For each set of mutant data, the repeats were averaged, and a Z test [Z=(observedexpected)\/SE] was performed in Excel. A moderate correction for multiple testing (~17,600 genes) was performed by multiplying the calculated P-value by 10,000. After this correction, all genes with up- or downregulation greater than twofold, P<0.05 in any given mutant were selected. The hypergeometric probability test was used to calculate the significance of overlap of gene groups. Authors determined whether transcripts of Group I-IV genes are bound by GLD-1, based on a minimum criteria of >1.5 enrichment in GLD-1 immunoprecipitated samples compared to control immunoprecipitations (P < 0.01). | ||
| Reference | WBPaper00027758 | ||
| Microarray_results | SMD_F17C8.6 | ||
| SMD_C27F2.2 | |||
| SMD_R151.5 | |||
| SMD_B0280.4 | |||
| SMD_T27E9.2 | |||
| SMD_Y55B1A_120.D | |||
| SMD_F56D1.6 | |||
| SMD_C08D8.1 | |||
| SMD_F38E1.10 | |||
| SMD_C31H1.6 | |||
| SMD_F42E11.4 | |||
| SMD_C04F6.3 | |||
| SMD_C09G5.7 | |||
| SMD_F40E10.1 | |||
| SMD_C09B8.6 | |||
| SMD_K08C7.3 | |||
| SMD_F08F3.9 | |||
| SMD_F55C5.9 | |||
| SMD_K01D12.11 | |||
| SMD_JC8.8 | |||
| SMD_F36D3.4 | |||
| SMD_C50B6.8 | |||
| SMD_F36H12.7 | |||
| SMD_F56G4.3 | |||
| SMD_F56G4.2 | |||
| SMD_R13H9.2 | |||
| SMD_C54D10.10 | |||
| SMD_F28H6.1 | |||
| SMD_T27E4.8 | |||
| SMD_T27E4.9 | |||
| SMD_Y46H3A.D | |||
| SMD_Y55F3A_747.B | |||
| SMD_F35E12.10 | |||
| SMD_F42A9.1 | |||
| SMD_F46E10.2 | |||
| SMD_F57A10.2 | |||
| SMD_T26F2.2 | |||
| SMD_Y67D8A_386.B | |||
| Gene (42) | |||
| Attribute_of | Microarray_experiment | WBPaper00027758:efl-1(n3639)_vs_N2_1 | |
| WBPaper00027758:efl-1(n3639)_vs_N2_2 | |||
| WBPaper00027758:efl-1(n3639)_vs_N2_3 | |||
| WBPaper00027758:efl-1(n3639)_vs_N2_4 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_1 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_2 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_3 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_1 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_2 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_3 | |||
| Regulation | Regulated_by_gene | WBGene00001161 | |
| WBGene00003020 | |||
| WBGene00001061 | |||
| Associated_with | Life_stage | WBls:0000057 |
