WormBase Tree Display for Expression_cluster: WBPaper00027758:Group_II
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| WBPaper00027758:Group_II | Description | Genes with lower expression in efl-1, dpl-1 and lin-35 mutants than in control gonads. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | For each set of mutant data, the repeats were averaged, and a Z test [Z=(observedexpected)\/SE] was performed in Excel. A moderate correction for multiple testing (~17,600 genes) was performed by multiplying the calculated P-value by 10,000. After this correction, all genes with up- or downregulation greater than twofold, P<0.05 in any given mutant were selected. The hypergeometric probability test was used to calculate the significance of overlap of gene groups. Authors determined whether transcripts of Group I-IV genes are bound by GLD-1, based on a minimum criteria of >1.5 enrichment in GLD-1 immunoprecipitated samples compared to control immunoprecipitations (P < 0.01). | ||
| Reference | WBPaper00027758 | ||
| Microarray_results (43) | |||
| Gene (44) | |||
| Attribute_of | Microarray_experiment | WBPaper00027758:efl-1(n3639)_vs_N2_1 | |
| WBPaper00027758:efl-1(n3639)_vs_N2_2 | |||
| WBPaper00027758:efl-1(n3639)_vs_N2_3 | |||
| WBPaper00027758:efl-1(n3639)_vs_N2_4 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_1 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_2 | |||
| WBPaper00027758:dpl-1(n3316)_unc-4(e120)_vs_unc-4(e120)_3 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_1 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_2 | |||
| WBPaper00027758:lin-35(n745)_vs_N2_3 | |||
| Regulation | Regulated_by_gene | WBGene00001161 | |
| WBGene00003020 | |||
| WBGene00001061 | |||
| Associated_with | Life_stage | WBls:0000057 |
