WormBase Tree Display for Expression_cluster: WBPaper00038168:lin-35_upregulated
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| WBPaper00038168:lin-35_upregulated | Description | Genes that were upregulated in lin-35. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | For each gene in each microarray hybridization experiment, the ratio of RNA levels from the two samples was transformed into a log2 value and the mean log2 ratio was calculated. The log2 ratios were normalized by print-tip Loess normalization (Dudoit and Yang, 2002). All genes with a false discovery rate of <= 5% (q <= 0.05) (Storey and Tibshirani, 2003) and a mean fold-change ratio of >= 1.5 were selected for further analysis. | ||
| Reference | WBPaper00038168 | ||
| Based_on_WB_Release | |||
| Gene (661) | |||
| Attribute_of | Microarray_experiment | WBPaper00038168:lin-35_rep1 | |
| WBPaper00038168:lin-35_rep2 | |||
| WBPaper00038168:lin-35_rep3 | |||
| WBPaper00038168:lin-35_rep4 | |||
| WBPaper00038168:lin-35_mes-4(RNAi)_rep1 | |||
| WBPaper00038168:lin-35_mes-4(RNAi)_rep2 | |||
| WBPaper00038168:lin-35_mes-4(RNAi)_rep3 | |||
| WBPaper00038168:lin-35_mes-4(RNAi)_rep4 | |||
| Regulation | Regulated_by_gene | WBGene00003020 | |
| Associated_with | Life_stage | WBls:0000024 |
