WormBase Tree Display for Expression_cluster: WBPaper00038172:aak-2overexpression_up_regulated
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| WBPaper00038172:aak-2overexpression_up_regulated | Description | Genes up regulated in aak-2 over expression line uthIs202[Paak-2c | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | To identify genes that were significantly differentially expressed between each mutant and the control, linear modelling and empirical Bayes analysis was performed using the limma package. Limma computes an empirical Bayes adjustment for the t-test (moderated t-statistic), which is more robust than the standard two-sample t-test comparisons. To correct for multiple testing, Benjamin and Hochbergs method to control for false discovery rate was used. Genes with an adjusted P value of 0.05 or smaller and a fold-change in expression larger than twofold were considered differentially expressed. | ||
| Reference | WBPaper00038172 | ||
| Microarray_results (1258) | |||
| Gene (1164) | |||
| Attribute_of | Microarray_experiment | WBPaper00038172:WT_1 | |
| WBPaper00038172:WT_2 | |||
| WBPaper00038172:WT_3 | |||
| WBPaper00038172:aak-2overexpress_1 | |||
| WBPaper00038172:aak-2overexpress_2 | |||
| WBPaper00038172:aak-2overexpress_3 | |||
| Regulation | Regulated_by_gene | WBGene00020142 | |
| Associated_with | Life_stage | WBls:0000038 |
