WormBase Tree Display for Expression_cluster: WBPaper00040990:PA14_downregulated
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| WBPaper00040990:PA14_downregulated | Description | Genes with expression level repressed by bacteria strain PA14. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Gene expression profiles obtained with microarrays were analyzed by a multi-class t-test using Significance Analysis of Microarrays (SAM), implemented as part of the TMEV software package. Based on T statistics the test retrieves genes with a T value above a cutoff score estimated to give the desired false discovery rate (selected to be 10%). | ||
| Reference | WBPaper00040990 | ||
| Gene (100) | |||
| Attribute_of | Microarray_experiment | WBPaper00040990:OP50_HandPicked_rep1 | |
| WBPaper00040990:OP50_WormSorter_rep2 | |||
| WBPaper00040990:OP50_WormSorter_rep3 | |||
| WBPaper00040990:PA14_non-colonized_HandPicked_rep1 | |||
| WBPaper00040990:PA14_non-colonized_WormSorter_rep2 | |||
| WBPaper00040990:PA14_non-colonized_WormSorter_rep3 | |||
| WBPaper00040990:PA14_colonized_HandPicked_rep1 | |||
| WBPaper00040990:PA14_colonized_WormSorter_rep2 | |||
| WBPaper00040990:PA14_colonized_WormSorter_rep3 | |||
| Regulation | Regulated_by_treatment | Bacteria infection: Pseudomonas aeruginosa PA14 | |
| Associated_with | Life_stage | WBls:0000057 | |
| Remark | Type: Bacteria Infection |
