WormBase Tree Display for Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
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| WBPaper00041466:PP_germline-ablation_regulated | Description | Genes that showed differential expression in the comparision of germline-ablated animals fed on E. coli OP50 versus un-ablated animals fed E. coli OP50. | ||
|---|---|---|---|---|
| Species | Pristionchus pacificus | |||
| Algorithm | Differential expression was calculated by empirical Bayes method using the eBayes function, and control of FDR was employed as the multiple testing correction. Authors used cutoff of absolute log2 fold change greater than or equal to 1.5 AND p_value less than or equal to 0.05 to call differentially expressed genes. | |||
| Reference | WBPaper00041466 | |||
| Microarray_results (3335) | ||||
| Gene (2307) | ||||
| Attribute_of | Microarray_experiment | WBPaper00041466:PP_germline-ablated_vs_PP_unablated_rep1 | ||
| WBPaper00041466:PP_germline-ablated_vs_PP_unablated_rep2-Dye-flip. | ||||
| WBPaper00041466:PP_germline-ablated_vs_PP_unablated_rep3-Dye-flip. | ||||
| Regulation | Regulated_by_treatment | Germline ablation | ||
| Associated_with | Anatomy_term | WBbt:0005784 | Expressed | |
| Dissection | ||||
| Remark | Life_stage: P. pacificus J2 stage. |
