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WormBase Tree Display for Expression_cluster: WBPaper00044091:Bpseudomallei_repressed_12h

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Name Class

WBPaper00044091:Bpseudomallei_repressed_12hDescriptionGenes that showed decreased expression in adult animals after 12 hour exposure to B. pseudomallei R15 vs. exposure to OP50
SpeciesCaenorhabditis elegans
AlgorithmAfter array normalization, significance analysis of microarray was performed on data from individual time points (two class unpaired response) to identify genes with small but consistent changes. A false-discovery rate (FDR) of ~1% was used as criteria to consider a gene differentially regulated.Authors chose this particular FDR because it was the lowest FDR that did not significantly reduce the number of estimated true positives.
ReferenceWBPaper00044091
Microarray_resultsSMD_F09G8.8
SMD_F23B2.11
SMD_F37B4.2
SMD_F38A1.5
SMD_F41H10.8
SMD_T05E7.1
SMD_C24B9.3
SMD_C28C12.6
SMD_E01G6.3
SMD_F08H9.8
SMD_F10D2.9
SMD_F13D12.6
SMD_F15E11.1
SMD_F15E11.12
SMD_F18E3.7
SMD_F22A3.6
SMD_F27E5.1
SMD_F32A5.3
SMD_F32A5.5
SMD_F49C12.7
SMD_F56F10.1
SMD_F57F5.1
SMD_F58B3.2
SMD_K11D2.2
SMD_R03G5.5
SMD_R11G11.14
SMD_T08H10.2
SMD_VW02B12L.1
SMD_VZK822L.1
SMD_W02D7.2
SMD_Y119D3_451.B
SMD_Y38F1A.6
SMD_Y40H7A.10
SMD_Y40H7A.9
SMD_Y49E10.18
SMD_Y53F4C.J
SMD_Y69F12A.B
SMD_Y69F12A.C
SMD_ZK112.1
SMD_F41H10.7
SMD_T05A1.6
SMD_0K09E2.3
SMD_9Y6E2A.3
SMD_B0218.6
SMD_B0218.8
SMD_C02A12.4
SMD_C04F6.1
SMD_C05D12.6
SMD_C05E4.9
SMD_C06G3.5
SMD_C07B5.5
SMD_C12D5.7
SMD_C14C6.2
SMD_C14F11.1
SMD_C15H9.1
SMD_C23G10.11
SMD_C24B9.9
SMD_C28C12.5
SMD_C29F4.2
SMD_C33G8.2
SMD_C33G8.2:2
SMD_C33G8.3
SMD_C35C5.7
SMD_C35C5.8
SMD_C36A4.1
SMD_C36A4.2
SMD_C36E6.B
SMD_C36E6.F
SMD_C42D8.2
SMD_C46H11.2
SMD_C48A7.2
SMD_C49C8.4
SMD_C50F4.8
SMD_C52E4.1
SMD_C56G2.6
SMD_D2023.1
SMD_E01A2.B
SMD_F01F1.12
SMD_F08H9.5
SMD_F09F7.6
SMD_F10G2.3
SMD_F14D7.6
SMD_F15E11.9
SMD_F15E6.3
SMD_F15E6.4
SMD_F17E9.11
SMD_F21C10.10
SMD_F25B4.9
SMD_F27C8.1
SMD_F28A12.4
SMD_F28D1.3
SMD_F28D1.5
SMD_F28F8.2
SMD_F28G4.1
SMD_F32B5.1
SMD_F35B12.2
SMD_F35C8.5
SMD_F35F10.1:2
SMD_F36D3.9
SMD_F36D3.9:2
SMD_F39E9.2
SMD_F41C3.3
SMD_F41E6.2
SMD_F41E6.5
SMD_F43C9.1
SMD_F44A6.5
SMD_F45D11.C
SMD_F45D11.D
SMD_F45D11.N
SMD_F45D11.O
SMD_F45D11.Q
SMD_F45D11.S
SMD_F46B6.8
SMD_F46C5.1
SMD_F46H5.3
SMD_F53A9.10
SMD_F54F11.2
SMD_F54F3.3
SMD_F56A4.J
SMD_F56B6.1
SMD_F56H11.6
SMD_F56H9.2
SMD_F58A4.6
SMD_F58B3.1
SMD_F58B3.3
SMD_F58E10.7
SMD_F58F6.2
SMD_F58H7.3
SMD_F59B8.2
SMD_F59D8.A
SMD_F59D8.B
SMD_F59D8.C
SMD_F59D8.D
SMD_F59D8.E
SMD_F59D8.F
SMD_H18N23.A
SMD_H22K11.1
SMD_H22K11.1:2
SMD_H24O09.A
SMD_H24O09.C
SMD_H24O09.E
SMD_H24O09.F
SMD_K01A2.2
SMD_K02E7.6
SMD_K04A8.5
SMD_K04F1.1
SMD_K07C6.2
SMD_K07C6.3
SMD_K07C6.4
SMD_K07E3.3
SMD_K07E3.4
SMD_K07E8.3
SMD_K07H8.6
SMD_K08C7.5
SMD_K08F9.3:2
SMD_K09F5.2
SMD_K10C2.3
SMD_K12G11.3
SMD_K12G11.4
SMD_K12H4.7
SMD_M02F4.4
SMD_R09B5.6
SMD_R09D1.10
SMD_R09D1.11
SMD_R12A1.4
SMD_T02B5.1:2
SMD_T05F1.11
SMD_T07G12.5
SMD_T07H3.3
SMD_T07H3.6
SMD_T08A9.7
SMD_T08A9.9
SMD_T12B3.3
SMD_T12D8.5
SMD_T13F3.6
SMD_T14B4.4
SMD_T20G5.2
SMD_T22B7.2
SMD_T22F3.11
SMD_T27A10.4
SMD_T27A10.7
SMD_T28D6.3
SMD_T28F3.8
SMD_W05E10.4
SMD_W05E7.1
SMD_W05G11.6
SMD_W05G11.6:2
SMD_W06G6.11
SMD_W07B8.4
SMD_W07B8.5
SMD_W07E11.1
SMD_W07G4.5
SMD_W08D2.4
SMD_W10C8.5
SMD_Y32G9A_367.A
SMD_Y39G10A_246.J
SMD_Y40C5A.A
SMD_Y46C8_99.A
SMD_Y47H10A.D
SMD_Y49E10.16
SMD_Y5H2B.C
SMD_Y69A2A_7278.F
SMD_Y6G8.2
SMD_ZC395.5
SMD_ZK512.7
SMD_ZK6.7
SMD_ZK6.7:2
SMD_ZK666.7
SMD_ZK673.1
SMD_F28H7.3
SMD_F49E12.9
SMD_R08F11.1
SMD_T10H9.5
SMD_Y38H6C.1:2
SMD_Y46H3B.B
SMD_F49E11.10
SMD_0ZK637.13
SMD_1T19A6.3
SMD_3C09E8.3
SMD_5C25B8.4
SMD_7T11B7.5
SMD_9F09F7.2
SMD_AC3.2
SMD_AC3.5
SMD_AC3.7
SMD_AC3.7:2
SMD_ATP6
SMD_B0035.13
SMD_B0218.1
SMD_B0228.7
SMD_B0361.9
SMD_B0432.4
SMD_B0454.5
SMD_C01F1.3
SMD_C01G10.9
SMD_C03G6.17
SMD_C04E12.2
SMD_C04E12.3
SMD_C05C10.4
SMD_C05D11.5
SMD_C06B3.4
SMD_C06G3.3
SMD_C07D10.5
SMD_C08A9.1
SMD_C08F11.3
SMD_C10G11.5
SMD_C14A4.7
SMD_C14A6.1
SMD_C14F5.2
SMD_C16C8.3
SMD_C17G1.3
SMD_C17G1.4
SMD_C23H3.2
SMD_C23H5.8A
SMD_C24A3.5
SMD_C24B5.4
SMD_C25B8.3
SMD_C25E10.3
SMD_C29E4.7
SMD_C30F12.7
SMD_C31H1.5
SMD_C34F6.3
SMD_C36C5.13
SMD_C37A5.4
SMD_C39D10.4
SMD_C39E9.2
SMD_C40H1.5
SMD_C43C3.3
SMD_C44E12.1
SMD_C44F1.3
SMD_C44H4.3
SMD_C46G7.2
SMD_C47A10.5
SMD_C48B4.1
SMD_C49F5.7
SMD_C49G7.11
SMD_C50F4.1
SMD_C50F7.10:2
SMD_C53A5.1
SMD_C53A5.5
SMD_C53B4.8
SMD_C53B7.4:2
SMD_C55B7.4
SMD_COI
SMD_COII
SMD_COIII
SMD_CTEL54X.1
SMD_D1025.4
SMD_D2024.2
SMD_D2030.2
SMD_D2030.5
SMD_DH11.2
SMD_E01A2.C
SMD_E01G4.5
SMD_F01D5.5:2
SMD_F01G10.7
SMD_F01G4.6
SMD_F02E8.1
SMD_F07H5.5
SMD_F08D12.10
SMD_F08H9.4
SMD_F09E8.5
SMD_F10D11.5
SMD_F10G2.1
SMD_F11A5.12
SMD_F11A5.9
SMD_F11C1.3
SMD_F13D12.1
SMD_F15E6.2
SMD_F17B5.1
SMD_F22B7.9
SMD_F23H11.5
SMD_F25E5.8
SMD_F26E4.6
SMD_F26E4.9
SMD_F26G1.4
SMD_F27D9.5
SMD_F27D9.6
SMD_F28H1.2
SMD_F29B9.11
SMD_F29G9.1
SMD_F32G8.6
SMD_F35F10.3
SMD_F36F12.1
SMD_F37C4.6
SMD_F38B2.4
SMD_F38E11.1
SMD_F40E10.3
SMD_F40F4.4
SMD_F40F8.4
SMD_F41C3.7
SMD_F42A6.5
SMD_F42F12.1:2
SMD_F42G8.12
SMD_F42G9.2
SMD_F43C11_37.G
SMD_F44E7.2:2
SMD_F44G3.2
SMD_F45C12.14
SMD_F46A8.7
SMD_F46F3.1
SMD_F48G7.2
SMD_F49E12.10
SMD_F49H12.E
SMD_F52B11.3
SMD_F53A9.8
SMD_F53B3.4
SMD_F54C1.7
SMD_F54D11.1
SMD_F54D5.3
SMD_F54D8.2
SMD_F54D8.2:2
SMD_F54D8.3
SMD_F55A12.4
SMD_F55G1.14
SMD_F55G11.4
SMD_F55G11.8
SMD_F57C2.5
SMD_F58F12.1
SMD_F58H1.2
SMD_F59D6.3
SMD_H10D18.C
SMD_H16D19.1
SMD_H42K12.3
SMD_K01A2.3
SMD_K01A2.4
SMD_K01A2.9
SMD_K02E10.3
SMD_K02E11.5
SMD_K02E2.7
SMD_K02E7.6:2
SMD_K02F3.9
SMD_K05F6.7:2
SMD_K06A4.3
SMD_K07D4.8
SMD_K08D10.6
SMD_K08D8.5
SMD_K08D8.5:2
SMD_K09A9.5
SMD_K09C6.9
SMD_K09G1.1
SMD_K09H9.5
SMD_K11D12.7
SMD_K11G12.5
SMD_K11G9.6
SMD_M02D8.1
SMD_M04G12.2
SMD_M176.7
SMD_M18.1
SMD_ND1
SMD_ND4
SMD_ND6
SMD_R01B10.2
SMD_R04F11.2
SMD_R07B7.11
SMD_R07E3.1
SMD_R09B5.4
SMD_R09D1.12
SMD_R09F10.1
SMD_R09H10.3
SMD_R11A5.4
SMD_R11A5.6
SMD_R11D1.3
SMD_R11G10.2
SMD_R12C12.1
SMD_R12C12.1:2
SMD_R13D7.7
SMD_R13H4.2
SMD_R148.6
SMD_R53.4
SMD_T01B11.5
SMD_T02B5.1
SMD_T03F1.10
SMD_T04A11.1
SMD_T04A11.4
SMD_T05H4.12
SMD_T07C12.7
SMD_T07C12.9
SMD_T07C4.4
SMD_T07D10.4
SMD_T07H6.3:2
SMD_T08A9.8
SMD_T08G5.10
SMD_T09A12.2
SMD_T10B5.7
SMD_T13C5.5
SMD_T13F2.1
SMD_T13F2.1:2
SMD_T14B4.4:2
SMD_T14F9.3
SMD_T14G12.3
SMD_T15B7.1
SMD_T15B7.2
SMD_T19C4.1
SMD_T20B3.2
SMD_T21H3.1
SMD_T22B7.3
SMD_T22E5.5
SMD_T23D8.2
SMD_T24F1.5
SMD_T25F10.6
SMD_T27A3.6
SMD_T27E4.1
SMD_T28D9.1
SMD_W01C9.2
SMD_W02A2.1
SMD_W02D3.5
SMD_W02D3.6
SMD_W02H5.A
SMD_W03B1.6
SMD_W03F11.5
SMD_W04E12.6
SMD_W04E12.8
SMD_W04G3.1
SMD_W04G3.2
SMD_W04G3.2:2
SMD_W04G3.3
SMD_W06B11.3
SMD_W08A12.3
SMD_W09C5.8
SMD_W10G6.3
SMD_Y102A5B.3
SMD_Y110A2A_54.A
SMD_Y110A2A_54.C
SMD_Y116F11A.EE
SMD_Y119D3_446.A
SMD_Y119D3_446.C
SMD_Y11D7A.2
SMD_Y19D10A.J
SMD_Y24F12A.C
SMD_Y37A1B.5
SMD_Y37D8A.14
SMD_Y38E10A.N
SMD_Y38H6C.16
SMD_Y38H6C.19
SMD_Y41D4B_930.B
SMD_Y42G9A.D
SMD_Y43F8B.7
SMD_Y45F10C.4
SMD_Y46H3C.C
SMD_Y46H3C_14.C
SMD_Y49E10.8
SMD_Y66H1A.5
SMD_Y67H2B.A
SMD_Y71D11A.C
SMD_Y71F9B_297.A
SMD_Y71H2_388.C
SMD_Y73F4A.3
SMD_Y76A2B.5
SMD_Y7A5A.1
SMD_Y9D1A.1
SMD_Y9D1A.2
SMD_ZC123.1
SMD_ZC204.12
SMD_ZC334.3
SMD_ZC334.3:2
SMD_ZC410.5
SMD_ZC412.3
SMD_ZC513.7
SMD_ZK1290.8
SMD_ZK1320.9
SMD_ZK430.3
SMD_ZK455.1
SMD_ZK455.4
SMD_ZK593.3
SMD_ZK721.2
SMD_ZK822.4
SMD_ZK930.2
Gene (533)
Attribute_ofMicroarray_experimentWBPaper00044091:OP50_12h_rep1
WBPaper00044091:OP50_12h_rep2
WBPaper00044091:OP50_12h_rep3
WBPaper00044091:BpR15_12h_rep1
WBPaper00044091:BpR15_12h_rep2
WBPaper00044091:BpR15_12h_rep3
RegulationRegulated_by_treatmentBacteria infection: Burkholderia pseudomallei BpR15
Associated_withLife_stageWBls:0000057
RemarkType: Bacteria Infection