WormBase Tree Display for Expression_cluster: WBPaper00056391:HT115_downregulated
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| WBPaper00056391:HT115_downregulated | Description | Transcripts with significantly decreased expression by feeding on E. coli HT115 vs. E. coli OP50. in young adult glp-4(bn2) worms, grown on E. coli HT115 since L1 stage. Fold changes shown are normalized to the genes expression levels in E. coliOP50. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differentially regulated genes were determined on the basis of fold change (> 2) and the value of a modified Wilcoxon rank test (> 1.5). Th eWilcoxon coefficient was determined for each probe set as the smallest expression value in the condition with higher average divided by the highest expression value in the condition with lower average. | ||
| Reference | WBPaper00056391 | ||
| Microarray_results | 175619_s_at | Fold HT115 vs OP50: 0.49 | |
| 190145_s_at | Fold HT115 vs OP50: 0.49 | ||
| 184012_at | Fold HT115 vs OP50: 0.48 | ||
| 191886_s_at | Fold HT115 vs OP50: 0.46 | ||
| 191689_s_at | Fold HT115 vs OP50: 0.45 | ||
| 190067_at | Fold HT115 vs OP50: 0.44 | ||
| 193016_s_at | Fold HT115 vs OP50: 0.41 | ||
| 179302_at | Fold HT115 vs OP50: 0.39 | ||
| 188947_at | Fold HT115 vs OP50: 0.38 | ||
| 192528_at | Fold HT115 vs OP50: 0.36 | ||
| 192650_at | Fold HT115 vs OP50: 0.34 | ||
| 188822_at | Fold HT115 vs OP50: 0.34 | ||
| 189069_at | Fold HT115 vs OP50: 0.33 | ||
| 183014_at | Fold HT115 vs OP50: 0.31 | ||
| 190404_s_at | Fold HT115 vs OP50: 0.29 | ||
| 192692_s_at | Fold HT115 vs OP50: 0.28 | ||
| 193007_s_at | Fold HT115 vs OP50: 0.26 | ||
| 192195_at | Fold HT115 vs OP50: 0.24 | ||
| 180398_s_at | Fold HT115 vs OP50: 0.18 | ||
| 191652_at | Fold HT115 vs OP50: 0.15 | ||
| 180721_at | Fold HT115 vs OP50: 0.15 | ||
| 189178_at | Fold HT115 vs OP50: 0.05 | ||
| Gene (23) | |||
| Attribute_of | Microarray_experiment | WBPaper00056391:glp-4_OP50_repA | |
| WBPaper00056391:glp-4_OP50_repB | |||
| WBPaper00056391:glp-4_OP50_repC | |||
| WBPaper00056391:glp-4_HT115_repA | |||
| WBPaper00056391:glp-4_HT115_repB | |||
| WBPaper00056391:glp-4_HT115_repC | |||
| Regulation | Regulated_by_treatment | Bacteria: HT115 | |
| Associated_with | Life_stage | WBls:0000064 |
