WormBase Tree Display for RNAi: WBRNAi00077417
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| WBRNAi00077417 | Homol | Homol_homol | R07B5:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | atggcgaaaattctcatctttagatgtttacgtaataatagtggcaatcaattttcagactctgttctcgataagtcaaatattcgcgaagaaactcccgaagatgacgaacccggaccatccacaaagccatccggaaaacgacaacggggtaacaaatgcaataataccgaatcggaaccaaatccttctggtcgaaaaacttcagcaacctcgtcaggtcgaggaaaatatcgtaatagaagaacagatggaactgaagaagaggaggaagacgatgatccgacagattccgaacctttaaccactgatgatgaaaaaccctttgagacatccgttaacaaggaaaagaatgaaaaatcgagaagaggaaagaaagtttctaaaaagcgaaggtcagtggctggaaagaaattcccaccaaactttggagtcagagatcgagatgaacctaaaaaggctgaaaattctgaagatggtgagggtcttgagagtaagcctggaccatcaacagagatgattcttgtggaaaaggttgaagaagaagaagcgaaagtcactgtatcagatataaatatgcaagcttctgaatcgaagattgaaggcatcgaacaaacatcagaagtagatattccaaaaagtgacgaggatcatcaatcgacagaagcttatgatagagtagaagacgaggttccgataacggactacaatattcccacacctgattcctaccattcttctccacctcattctccaacaccttctcctcagcctcaactgatgcaggcacaacaaaacatatatcaggacaatgattgtcattttgctgagaatgacagtaaaccacctcatctggtgtctgaagtagatgatcctgcagcgccacagccaactgtaactcttcaaagtggaccttcagatgcaccacctctttcccataattcagtggacggatattcgactggagacgacgatgcgccaccaaatctgtcaccacaaattgggaaaagtgaaaataatgaagaagaaatgccgttgattgctccaattgtgcagcacaatggtataactcatcacgaggaatctactgctcaacattatcacgattcaatgaatgcaggaccatcgacatcatctcatgtaacaccacaaatgagcatgattaatacaactccacaacaacctccattctctcatcccaactcacagcagcaagcgacgcctggatcgggaggtgttccatcatgtggtccagcctacactcatcatactccagaacaacaaagtcaacaattcatgagtcctcccatggctggaatgcctgcttctgttgcatccaatcattcaatccataatagtaattctattgaaatggttggtggacctgcttcgcttcagcatactcctcagcaatatgagatgggacattcaatggctcaggagagtgcaatcggaggaatcaatactgtgcctagtattgagcaacaaaatcagctcatgttacaacatcatcagtttagcagtcctccagctgctcctcctccatctcaacaacaacaagttgttcagcctccaattccacctgcacctaccaccgccaatggccgaagaaggtccgaatcggctgctacacaacggactaaggcgagacaacagcatcaacatcagcaacaacaaccgcagcaaccacaacagagaatagcagctcctggtgtacctcaaggagttcatccacagatgcaattcccaatgaacgcaatgaatatgatgccagcatatccaccgttctatccatacaccaactatcctaatatttggcagcccccgtatcagaattatccatacaaccaagtggactatcagcagccatggttgtataacaatggacatattccgcatcaaacaaatggaactgccaccaatcagttccatccagggcacatgggatatttccccaacaataatggtcgataa | |||
| Experiment | Laboratory | OH | |||
| Date | 25 Jul 2008 00:00:00 | ||||
| Genotype | nre-1 lin-15 | ||||
| Treatment | Authors scored with either ASEL marker lim-6::gfp (otIs114), which is lost in ASEL; or with ASER marker gcy-5::gfp (otIs186), which is ectopically expressed in ASEL. Animals are scored as late larvae or adults. | ||||
| Inhibits | Predicted_gene | R07B5.9d | Inferred_automatically | RNAi_primary | |
| R07B5.9c | Inferred_automatically | RNAi_primary | |||
| R07B5.9i | Inferred_automatically | RNAi_primary | |||
| R07B5.9h | Inferred_automatically | RNAi_primary | |||
| R07B5.9f | Inferred_automatically | RNAi_primary | |||
| R07B5.9a | Inferred_automatically | RNAi_primary | |||
| R07B5.9j | Inferred_automatically | RNAi_primary | |||
| R07B5.9g | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00045419 | Inferred_automatically | RNAi_primary | ||
| Transcript (11) | |||||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00032078 | ||||
| Phenotype | WBPhenotype:0000216 | Remark | loss of a fate marker in the excretory gland cell, scored with lim-6::gfp | ||
| Penetrance | Range | 50 | |||
| WBPhenotype:0001660 | Remark | ASE asymmetry is disrupted and 2 ASER are specificed | |||
| Penetrance | Range | 10 | |||
| Remark | exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation | ||||
| Method | RNAi |
