WormBase Tree Display for RNAi: WBRNAi00086735
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| WBRNAi00086735 | Homol | Homol_homol | Y55D5A:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | atgaatattgtcagatgtcggagacgacacaaaattttggaaaatttggaagaagagaatctcggcccgagctgctcgtcgacgacttcaacaaccgctgccaccgaagctctcggaacaaccactgaggatatgaggcttaagcagcagcgaagctcgtcgcgtgccacggagcacgatattgtcgacggcaatcaccacgacgacgagcacatcacaatgagacggcttcgacttgtcaaaaattcgcggacgcggcgtagaacgacgcccgattcaagtatggactgctatgaggaaaacccgccatcacaaaaaacttcaataaattattcttggatttctaaaaagtcatcaatgacgtcattaatgcttttactgctattcgcttttgtacagccgtgtgcctcaatagtcgaaaaacgatgcggcccaatcgatattcgaaataggccgtgggatattaagccgcaatggtcgaaacttggtgatccgaacgaaaaagatttggctggtcagagaatggtcaactgcacagtggtggaaggttcgctgacaatctcatttgtactgaaacacaagacaaaagcacaagaagaaatgcatcgaagtctacagccaagatattcccaagacgaatttatcacttttccgcatctacgtgaaattactggaactctgctcgtttttgagactgaaggattagtggatttgcgtaaaattttcccaaatcttcgtgtaattggaggccgttcgctgattcaacactatgcgctgataatttatcgaaatccggatttggagatcggtcttgacaagctttccgtaattcgaaatggtggtgtacggataatcgataatcgaaaactgtgctacacgaaaacgattgattggaaacatttgatcacttcttccatcaacgatgttgtcgttgataatgctgccgagtacgctgtcactgagactggattgatgtgcccacgtggagcttgcgaagaggataaaggcgaatcaaagtgtcattatttggaggaaaagaatcaggaacaaggtgtcgaaagagttcagagttgttggtcgaacaccacttgccaaaagtcttgtgcttatgatcgtcttcttccaacgaaagaaatcggaccgggatgtgatgcgaacggcgatcgatgtcacgatcaatgcgtgggcggttgtgagcgtgtgaatgatgcgacagcatgccacgcgtgcaagaatgtctatcacaagggaaagtgtatcgaaaagtgtgatgctcacctgtaccttctccttcaacgtcgttgtgtgacccgtgagcagtgtctgcagctgaatccggtgctctcgaacaaaacagtgcctatcaaggcgacggcaggcctttgctcggataaatgtcccgatggttatcaaatcaacccggatgatcatcgagaatgccgaaaatgcgttggcaagtgtgagattgtgtgcgagatcaatcacgtcattgatacgtttccgaaggcacaggcgatcaggctatgcaatattattgacggaaatctgacgatcgagattcgcggaaaacaggattcgggaatggcgtccgagttgaaggatatatttgcgaacattcacacgatcaccggctacctgttggtacgtcaatcgtcaccgtttatctcgttgaacatgttccggaatttacgacgtattgaggcaaagtcactgttcagaaatctatatgctatcacagtttttgaaaatccgaatttaaaaaagctattcgattcaacgacggatttgacgcttgatcgtggaactgtgtcaattgccaataacaagatgttatgcttcaagtatatcaagcagctaatgtcaaagttaaatataccactcgatccgatagatcaatcagaagggacaaatggtgagaaggcaatctgtgaggatatggcaatcaacgtgagcatcacagcggtcaacgcggactcggtcttctttagttggccctcattcaacattaccgatatagatcagcgaaagtttctcggctacgagctcttcttcaaagaagtcccacgaatcgatgagaacatgacgatcgaagaggatcgaagtgcgtgtgtcgattcgtggcagagtgtcttcaaacagtactacgagacgtcgaacggtgaaccgaccccggacatttttatggatattggaccgcgcgagcgaattcggccgaatacgctctacgcgtactatgtggcgacgcagatggtgttgcatgccggtgcgaagaacggtgtatcgaagattggttttgtgaggacgagctactatacgcctgatcctccgacgttggcactagcgcaagtcgattcggacgctattcatattacgtgggaagcgccgctccaaccgaacggagacctcacgcattacacaattatgtggcgtgagaatgaagtgagcccgtacgaggaagccgaaaagttttgtacagatgcaagcacccccgcaaatcgacaacacacgaaagatccgaaagagacgattgtagccgataagccagtcgatattccgtcatcacgtaccgtagctccgacacttttgactatgatgggtcacgaagatcagcagaaaacgtgcgctgcaacgcccggttgttgttcgtgttcggctatcgaagaatcatcggaacagaacaagaagaagcgaccggatccgatgtcggcgatcgaatcatctgcatttgagaataagctgttggatgaggttttaatgccgagagacacgatgcgagtgagacgatcaattgaagacgcgaatcgagtcagtgaagagttggaaaaagctgaaaatttgggaaaagctccaaaaactctcggtggaaagaagccgctgatccatatttcgaagaagaagccgtcgagcagcagcaccacatccacaccggctccaacgatcgcatcaatgtatgccttaacaaggaaaccgactacggtgccgggaacaaggattcggctctacgagatctacgaacctttacccggaagctgggcgattaatgtatcagctctggcattggataatagttatgtgatacgaaatttgaagcattacacactttatgcgatttctctatccgcgtgccaaaacatgacagtacccggagcatcttgctcaatatcccatcgtgcgggagcattgaaacgaacaaaacacatcacagacattgataaagtgttgaatgaaacaattgaatggagatttatgaataatagtcaacaagtcaacgtgacgtgggatccaccgactgaagtgaatggtggaatattcggttatgttgtaaagcttaagtcaaaagtcgatggatcaattgttatgacgagatgtgtcggtgcgaagagaggatattcaacacggaatcagggtgtcctattccagaatttggccgatggacgttattttgtctcagtaacggcgacctctgtacacggcgctggaccggaagccgaatcctccgacccaatcgtcgtcatgacgccaggcttcttcactgtggaaatcattctcggcatgcttctcgtctttttgattttaatgtcaattgccggttgtataatctactactacattcaagtacgctacggcaaaaaagtgaaagctctatctgactttatgcaattgaatcccgaatattgtgtggacaataagtacaatgcagacgattgggagctacggcaggatgatgttgtgctcggacaacagtgtggagagggatcattcggaaaagtgtacctaggaactggaaataatgttgtttctctgatgggtgatcgtttcggaccgtgtgctattaagattaatgtagatgatccagcgtcgactgagaatctcaactatctcatggaagctaatattatgaagaactttaagactaactttatcgtcaaactgtacggagttatctctactgtacaaccagcgatggttgtgatggaaatgatggatcttggaaatctccgtgactatctccgatcgaaacgcgaagacgaagtgttcaatgagacggactgcaactttttcgacataatcccgagggataaattccatgagtgggccgcacagatttgtgatggtatggcgtacctggagtcgctcaagttttgccatcgagatctcgccgcacgtaattgcatgataaatcgggatgagactgtcaagattggagatttcggaatggctcgtgatctattctatcatgactattataagccatcgggcaagcgtatgatgcctgttcgatggatgtcacccgagtcgttgaaagacggaaagtttgactcgaaatctgatgtttggagcttcggagttgttctctatgaaatggttacactcggtgctcagccatatattggtttgagtaatgatgaggtgttgaattatattggaatggcccggaaggttatcaagaagcccgaatgttgtgaaaactattggtataaggtgatgaaaatgtgctggagatactcacctcgggatcgtccgacgttcctccagctcgttcatcttctagcagctgaagcttcaccagaattccgagatttatcatttgtcctaaccgataatcaaatgatccttgacgattcagaagcactggatcttgatgatattgatgatactgatatgaatgatcaggttgtcgaggtggcaccggatgttgagaacgtcgaggttcagagtgattcggaacgtcggaatacggattcaataccgttgaaacagtttaagacgatccctccgatcaatgcgacgacgagtcattcgacaatatcgattgatgagacaccgatgaaagcgaagcagcgagaaggatcgctggatgaggagtacgcattgatgaatcatagtggaggtccgagtgatgcggaagttcggacgtatgctggtgatggagattatgtggagagagatgttcgagagaatgatgtgccaacgcgacgaaatactggtgcatcaacatcaagttacacaggtggtggtccatattgcctaacaaatcgtggtggttcaaatgaacgaggagccggtttcggtgaagcagtacgattaactgatggtgttggaagtggacatttaaatgatgatgattatgttgaaaaagagatatcatccatggatacgcgccggagcacgggcgcctcgagctcttcctacggtgttccacagacgaattggagtggaaatcgtggtgccacgtattatacgagtaaagctcaacaggcagcaactgcagcagcagcagcagcagcagctctccaacagcaacaaaatggtggtcgaggcgatcgattaactcaactacccggaactggacatttacaatcgacacgtggtggacaagatggagattatattgaaactgaaccgaaaaattatagaaataatggatctccatcgcgaaacggcaacagccgtgacattttcaacggacgttcggctttcggtgaaaatgagcatctaatcgaggataatgagcatcatccacttgtctga | |||
| Experiment | Laboratory | SAL | |||
| Date | 16 May 2007 00:00:00 | ||||
| Genotype | lys-7::GFP | ||||
| Treatment | Nematode eggs isolated by bleaching (100 to 200 eggs) were added to 96-well plates. Plates were assayed three days later on the COPAS Biosort. | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | Y55D5A.5e | Inferred_automatically | RNAi_primary | |
| Y55D5A.5g | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5f | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5c | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5d | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5a | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00000898 | Inferred_automatically | RNAi_primary | ||
| Transcript | Y55D5A.5g.1 | Inferred_automatically | RNAi_primary | ||
| Y55D5A.5e.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5b | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5f.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5a.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5c.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5d.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Interaction | WBInteraction000517586 | ||||
| Reference | WBPaper00029438 | ||||
| Phenotype | WBPhenotype:0001236 | Remark | daf-2(RNAi) increased the expression of the lys-7::GFP transgene | ||
| Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | ||||
| Method | RNAi |
