WormBase Tree Display for RNAi: WBRNAi00113912
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| WBRNAi00113912 | Homol | Homol_homol | ZK381:RNAi | ||
|---|---|---|---|---|---|
| T12F5:RNAi | |||||
| T21G5:RNAi | |||||
| T08D2:RNAi | |||||
| C55B7:RNAi | |||||
| C18G1:RNAi | |||||
| Sequence_info | DNA_text | cggtttcggtggggacggtggttttggtggaggcgaagaacgtggtccaatgaaatgtttcaactgtaaaggcgagggacatcgctctgctgaatgtccggagccaccccgtggatgtttcaattgtggcgagcaaggtcatcgctcgaatgagtgccccaatccagccaagccaagggaaggtgttgaaggagaaggacctaaggcgacatacgtgccagtcgaagacaacatggaggacgttttcaacatgcagaaaatttcggaaggccttatgttcaacaagtttttcgatgccgaagttaaactgacttcatccgagaagactgtcggtatcaaaccttgcaaga | |||
| ccaaagaaacatctacatcccagccaggattcggaggagattccagtacaggattcggaagtggtttaaaagctggattcggtggtcatggagcaggcgctgcggagaactctggattaccaacggaaacaaccggtttcggaggaaaactcccctcggctggatttggagcttcttcatcaaatgaatctgcttttggccaacaatctaagggttttggtggagcaacgaaaaacggattcggaggagattccagttcatcgtttggaagtggttctaaagctggattcggtggaacatcctcgtctggaatcggtggtcaaaaaccgggcgccacggagagctctgga | |||||
| tcgaattgttgaatcactggagaagtgttgtttgtccgatacaccaagtggcagaaagagcaatgtgcaaccatccacttcccaacagcaggattccgcctacacgaaagaggaaatgacgacggttcacaacacatacagcgtaaatactaaagctcaagttctcaacggtctcagtgataccaattcttccgggttacttgtcgattcaaaggattcactcagtcttcaggagatttcttgtgacgaagtggattcttcgactttgctaagctcatcaagaaacattggagaaggtgttactgtaaaagcggtcgatcctgtcccagaaaaggttaacgatgcacaac | |||||
| cgaccaaagttcgattctggcgctgagaagctgagtcagcttggacaagctcatgatttggctccaatcatcgatgatgaaaagaaaatctcgatgctcgcccgaaaaacaaagctaaagaagtcgaatgacgccaagattctgcaagtcttgctcaaagttctcggtgcggaagaagcggaagagaagtttgtcgagctctcggaactgtcgagcgccttggatcttgatttcgacgtctatgtcttggcaaaactgcttggatttgcatcggaggagctccaggaagaaattgaaatcatccgtgacaacgtcacagatgcgtttgaggcctgcaagccgttgttga | |||||
| Experiment | Genotype | daf-2(e1370) | |||
| Treatment | From Updike et al., 2014 Current Biology: "P-granule RNAi: 350 base pair fragments of glh-1 (cDNA base pairs 675-1024), glh-4 (749-1098), pgl-1 (1317-1666), and pgl-3 (265-613) were joined by PCR and cloned into the L4440 RNAi feeding vector to create pDU49, which was transformed into HT115 bacteria." Curated using indicated 350bp sequence ranges from first coding sequence found for each gene in the WS241 release (live March-May 2014). | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | C18G1.4a | Inferred_automatically | RNAi_primary | |
| ZK381.4b | Inferred_automatically | RNAi_primary | |||
| T12F5.3 | Inferred_automatically | RNAi_primary | |||
| T21G5.3 | Inferred_automatically | RNAi_primary | |||
| C18G1.4b | Inferred_automatically | RNAi_primary | |||
| ZK381.4a | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00001598 | Inferred_automatically | RNAi_primary | ||
| WBGene00001601 | Inferred_automatically | RNAi_primary | |||
| WBGene00003992 | Inferred_automatically | RNAi_primary | |||
| WBGene00003994 | Inferred_automatically | RNAi_primary | |||
| Transcript | C18G1.4b.1 | Inferred_automatically | RNAi_primary | ||
| T21G5.3.1 | Inferred_automatically | RNAi_primary | |||
| ZK381.4b.1 | Inferred_automatically | RNAi_primary | |||
| C18G1.4a.1 | Inferred_automatically | RNAi_primary | |||
| T12F5.3.1 | Inferred_automatically | RNAi_primary | |||
| ZK381.4a.2 | Inferred_automatically | RNAi_primary | |||
| ZK381.4a.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00049368 | ||||
| Phenotype_not_observed | WBPhenotype:0001171 | Remark | Figure 2A, RNAi started at adulthood | ||
| Remark | (Figure 2A) P-granule RNAi clone (Updike et al, 2014, Current Biology) | ||||
| Method | RNAi |
