WormBase Tree Display for RNAi: WBRNAi00115624
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| WBRNAi00115624 | Homol | Homol_homol | F52H3:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | ATGAGGGTTCTCCCTTTTCTACTACCACTAATACCCGTTCTCCTGGCAACCACAATAACCGATTTACCCGAACTGGTTGTAGTCACAGTTGCAACTGAAAATACAGATGGGCTTAAACGTCTTCTAGAATCTGCAAAAGCATTCGACATCAATATTGAAGTTCTTGGATTGGGCGAGAAGTGGAATGGTGGTGACACAAGAATCGAACAAGGTGGAGGCCAAAAAATTCGAATTCTTTCCGATTGGATTGAAAAATACAAAGACGCTTCGGATACAATGATCATGTTTGTGGATGCTTATGATGTTGTATTCAATGCTGATTCTACAACAATCCTCAGGAAGTTTTTCGAACATTACTCTGAAAAGCGTCTTCTATTCGGAGCTGAGCCATTCTGCTGGCCAGATCAGAGTTTGGCACCAGAATATCCTATTGTTGAGTTCGGGAAACGATTCTTGAATTCTGGCCTCTTCATGGGTTACGGTCCGGAAATGCACAAAATTCTGAAGTTGAAGTCCGTTGAGGATAAGGATGATGACCAGTTGTACTACACAATGATTTATCTTGATGAGAAGTTGAGAAAAGAATTGAATATGGATCTTGATTCAATGTCCAAGATCTTCCAAAACTTGAATGGAGTTATTGAAGATGTTGAACTTCAATTCAAAGAAGATGGAACTCCAGAAGCATATAATGCAGCTTATAACACCAAACCATTGATTGTTCATGGTAACGGTCCTAGCAAATCCCATTTGAACTACCTTGGAAATTATCTCGGAAACCGTTGGAATTCACAACTCGGATGTAGAACTTGTGGGCTTGAAGTGAAAGAATCTGAAGAAGTGCCACTGATTGCATTGAACCTTTTCATTTCGAAACCTATTCCATTCATTGAAGAAGTTCTACAAAAAATCGCTGAGTTTGACTATCCGAAAGAGAAAATTGCATTGTATATCTACAATAATCAGCCATTTTCAATTAAGAACATTCAAGACTTTTTGCAAAAACATGGGAAGTCATATTATACAAAGAGGGTTATCAATGGAGTCACAGAGATTGGAGACAGAGAAGCTAGGAATGAAGCAATAGAATGGAATAAAGCACGAAACGTAGAATTCGCCTTCCTCATGGACGGAGATGCCTATTTCTCCGAACCCAAAGTAATCAAGGATCTGATTCAATACTCCAAGACCTACGATGTTGGAATAATTGCTCCAATGATTGGTCAACCTGGAAAACTCTTCACCAACTTCTGGGGTGCAATTGCTGCAAATGGATACTACGCTAGAAGTGAAGATTATATGGCAATTGTCAAAGGAAATAGAGTTGGATATTGGAATGTTCCATTCATCACATCAGCTGTTCTATTTAACAAGGAAAAGCTTGAAGCCATGAAAGACGCATATAGTTATAACAAAAACTTGGATCCAGACATGTCAATGTGCAAGTTTGCAAGGGACAATGGACATTTCTTGTATATCGACAATGAAAAATATTATGGTTTTTTGATTGTTAGTGATGAGTATGCTGAAACTGTAACAGAAGGAAAATGGCATCCCGAAATGTGGCAGATTTTTGAGAATCGAGAGCTTTGGGAGGCTCGTTACATCCATCCAGGCTACCATAAAATCATGGAACCTGAACATGTAGTAGATCAAGCCTGTCCAGATGTCTACGATTTCCCACTGATGTCTGAGAGATTCTGTGAAGAGCTTATTGAAGAAATGGAAGGATTTGGACGATGGAGTGATGGAAGTAACAACGACAAACGTCTTGCGGGTGGATATGAGAATGTACCAACTCGAGATATTCATATGAATCAAGTTGGTTTTGAGAGACAATGGTTGTACTTTATGGACACGTATGTTCGTCCAGTACAAGAGAAGACTTTCATAGGATATTATCATCAGCCAGTTGAGTCCAATATGATGTTCGTTGTTCGTTACAAACCTGAAGAGCAACCATCGCTCCGCCCACATCATGATGCAAGCACTTTCAGTATTGATATTGCACTGAACAAGAAGGGAAGAGACTATGAAGGTGGAGGTGTACGATATATCAGATATAATTGCACGGTGCCAGCAGATGAAGTTGGCTATGCAATGATGTTCCCCGGAAGATTGACACATCTTCATGAGGGTCTTGCCACCACAAAGGGTACCAGATATATCATGGTATCCTTTATTAACCCATAA | |||
| Experiment | Strain | WBStrain00000001 | |||
| Treatment | Worms were fed with bacteria containing 5,5-dideuterolysine (D) in comparison with light lysine (H) (figure 3). | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | F52H3.1 | Inferred_automatically | RNAi_primary | |
| Gene | WBGene00002497 | Inferred_automatically | RNAi_primary | ||
| Transcript | F52H3.1.3 | Inferred_automatically | RNAi_primary | ||
| F52H3.1.1 | Inferred_automatically | RNAi_primary | |||
| F52H3.1.2 | Inferred_automatically | RNAi_primary | |||
| F52H3.1.4 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00050718 | ||||
| Phenotype | WBPhenotype:0000027 | Remark | Animals are hypersensitive to deuterated lysine. plod/let-268 RNAi, exhibiting almost 100 percent developmental failure at 25C and also strong effects at lower temperatures (20C). In control worms, developmental failure is only seen at higher temperatures and is not 100 percent penetrant. In addition to developmental failure in the plod/let-268 RNAi animals, there are many dead larvae and adults, and also some curved adults may be found. | ||
| Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | ||||
| Method | RNAi |
