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WormBase Tree Display for Feature: WBsf188319

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Name Class

WBsf188319SMapS_parentSequenceR13A1
Sequence_detailsFlanking_sequencesATTTAGTATGCTATAAATGGTTAGATTCATGTTCATTGAAGCAATCGAATCATTTTGGAT
Mapping_targetR13A1
Source_location190CHROMOSOME_IV72179837217984
OriginSpeciesCaenorhabditis elegans
VisibleDescriptionpolyA_site defined by RNASeq short reads (Hillier et al.)
Defined_byDefined_by_sequenceearly_embryo_bundle_of_reads_supporting_polyA_IV_7217983_-_wb170
late_embryo_20dC_4.5hrs_post-early_embryo_bundle_of_reads_supporting_polyA_IV_7217983_-_wb170
mid-L1_20dC_4hrs_post-L1_bundle_of_reads_supporting_polyA_IV_7217983_-_wb170
mid-L2_20dC_14hrs_post-L1_bundle_of_reads_supporting_polyA_IV_7217983_-_wb170
mid-L3_20dC_25hrs_post-L1_bundle_of_reads_supporting_polyA_IV_7217983_-_wb170
Young_Adult_25dC_46hrs_post-L1_bundle_of_reads_supporting_polyA_IV_7217983_-_wb170
elegans_PE_SS_GG8236|c9_g1_i1Inferred_automaticallymake_missing_tsl_features.pl
Defined_by_paperWBPaper00037808
WBPaper00037948
Defined_by_analysisRNASeq_Hillier.L1_larva
RNASeq_Hillier.L2_larva
RNASeq_Hillier.Young_Adult
RNASeq_Hillier.early_embryo
RNASeq_Hillier.late_embryo
RNASeq_Hillier.L3_larva
RNASeq_Fire.all_stages_ssRNALigSeq
Remark[110125 gw3] This polyA_site feature was defined by the Bartel paper.
Bartel data confident_cleavagesite score: 16284.0
MethodpolyA_site