WormBase Tree Display for CDS: Y32H12A.8c
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| Y32H12A.8c | SMap | S_parent | Sequence | CHROMOSOME_III | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (39) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A486WWW2 | ||
| UniProt | UniProtAcc | A0A486WWW2 | ||||
| AlphaFold | entry | A0A486WWW2 | ||||
| NCBI_protein | GI_number | GI:1615791681 | ||||
| Protein_id | CHROMOSOME_III | VGM69499 | 1 | |||
| DB_remark | contains similarity to Pfam domains PF00400 (WD domain, G-beta repeat), PF17120 (RING/Ubox like zinc-binding domain); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR044285 (Periodic tryptophan protein 1), IPR049566 (WDR59/RTC1-like, RING zinc finger domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Curator_confirmed | WBPerson1983 | ||||
| Visible | Gene | WBGene00021316 | ||||
| Corresponding_transcript | Y32H12A.8c.1 | |||||
| Corresponding_protein | CE53085 | |||||
| Corresponding_PCR_product | TH:332A10 | |||||
| cenix:332-a10 | ||||||
| mv_Y32H12A.8 | ||||||
| sjj_Y32H12A.a | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (14) | ||||||
| RNAi_result | WBRNAi00020183 | |||||
| WBRNAi00006862 | ||||||
| WBRNAi00055813 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | WDR59/RTC1-like RING zinc finger domain-containing protein | Accession_evidence | UniProt | TR:A0A486WWW2 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 11 Mar 2019 17:28:17 | WBPerson1983 | ||||
| Remark | [190311 pad] This structure has been created based on the RNASeq data. | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq | |||||
| Method | curated |
