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WormBase Tree Display for CDS: Y47G6A.8

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Name Class

Y47G6A.8EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY47G6A
StructureSource_exons190
4351142
19342085
21382336
DB_infoDatabaseKEGGKEGG_id3.1.-.-
SwissProtUniProtAccQ9N3T2
UniProtUniProtAccQ9N3T2
UniProt_GCRPUniProtAccQ9N3T2
AlphaFoldentryQ9N3T2
NCBI_proteinGI_numberGI:373220153
TREEFAMTREEFAM_IDTF105701
Protein_idCHROMOSOME_ICCD725531
DB_remarkCRN-1 protein; contains similarity to Pfam domains PF00752 (XPG N-terminal domain), PF00867 (XPG I-region); contains similarity to Interpro domains IPR036279 (5'-3' exonuclease, C-terminal domain superfamily), IPR006086 (XPG-I domain), IPR029060 (PIN-like domain superfamily), IPR006084 (XPG/Rad2 endonuclease), IPR006085 (XPG, N-terminal), IPR008918 (Helix-hairpin-helix motif, class 2)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000794
Corresponding_transcriptY47G6A.8.1
Corresponding_proteinCE22109
Corresponding_PCR_productcenix:72-e11
mv_Y47G6A.8
sjj_Y47G6A_247.i
Corresponding_oligo_set (19)
Matching_cDNA (65)
RNAi_result (51)
Microarray_results (20)
Brief_identificationFlap endonuclease 1Accession_evidenceUniProtSP:Q9N3T2
RNASeq_FPKM (74)
Associated_featureWBsf123164
Methodcurated