WormBase Tree Display for Sequence: Y54F10AR

Y54F10AR DNA: Y54F10AR 12281
  SMap: S_child: Gene_child: WBGene00021855 5322 1179
        WBGene00021854 9460 5933
      CDS_child: Y54F10AR.1 9460 7001
        Y54F10AR.1:wp157 10519 7001
        Y54F10AR.1:wp227 9015 7001
        Y54F10AR.2 5322 1243
        Y54F10AR.2:wp104 4360 1243
        Y54F10AR.2:wp157 5083 1243
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g25n11_x6_III_m 5322 1246
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g14n11_x6_III_m 9460 7004
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g18n11_x6_III_m 5322 1246
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g28n11_x6_III_m 9460 7004
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g29n11_x6_III_m 9460 7004
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g37n11_x6_III_m 5322 1246
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g25n11_x6_III_m 5322 3552
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g22n11_x6_III_m 9460 7004
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g40_x6_III_m 2455 1246
        RNASEQ_embryo_him-8_20dC_post-L1_g27n11_x6_III_m 9460 7004
        RNASEQ_embryo_him-8_20dC_post-L1_g41n11_x6_III_m 5322 1246
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g29n11_x6_III_m 9460 7004
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g54n11_x6_III_m 5322 1246
        RNASEQ_L4_soma_JK1107_no_DNaseI_g22n11_x6_III_m 9460 7004
        RNASEQ_L4_soma_JK1107_no_DNaseI_g18n11_x6_III_m 5322 1246
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g37n11_x6_III_m 5322 1246
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g22n11_x6_III_m 9460 7004
        RNASEQ_early_embryo_g63n11_x6_III_m 5322 1246
        RNASEQ_early_embryo_g50n11_x6t1_III_m 9460 7004
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g38n11_x6_III_m 9460 7004
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g51n11_x6_III_m 5322 1246
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g28n11_x6_III_m 5322 1246
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g28n11s6k181_x6_III_m 2455 2355
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g22n11_x6_III_m 9460 7004
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g36n11_x6_III_m 5322 1246
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g73_x6_III_m 9015 7004
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g38n11_x6_III_m 9460 7004
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g47n11_x6_III_m 5322 1246
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g38n11_x6_III_m 5322 1246
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g39_x6_III_m 8666 7004
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g21n11_x6_III_m 9491 9444
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g26n11_x6_III_m 5322 1246
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g24n11_x6_III_m 9460 7004
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g27n11_x6_III_m 5322 1246
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g28n11_x6_III_m 9460 7004
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g32n11_x6_III_m 9460 7004
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g42n11_x6_III_m 5322 1246
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g61n11_x6_III_m 9015 8837
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g21n11_x6_III_m 5322 1246
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g32n11_x6_III_m 9460 7004
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g39_x6t1_III_m 9015 7004
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g30n11_x6_III_m 5322 1246
        Y54F10AR.gc1 5322 1243
        Y54F10AR.gc2 9491 7001
        ContigIII.elegans.jigsaw.430.mRNA430 5355 1180
        ContigIII.elegans.jigsaw.431.mRNA431 9031 5848
        AG1201_Y54F10AR.2.T1 5322 1243
        AG1201_Y54F10AR.1.T6 6288 6061
        AG1201_Y54F10AR.1.T5 9460 7001
        AG1201_Y54F10AR.1.T1 9523 7001
      Transcript: Y54F10AR.1.1 9460 5933
        Y54F10AR.2.1 5322 1179
      PCR_product: cenix:190-g6 4093 4238
        cenix:63-g6 8280 8900
        mv_Y54F10AR.b 1245 4359
        sjj2_Y54F10AR.1 8252 9019
      Allele (312)
      Feature_object (113)
      Feature_data: Y54F10AR:Polysome 1 12281
        Y54F10AR:TranscriptionallyActiveRegion 1 12281
        Y54F10AR:ChIPSeqTF 1 12281
        Y54F10AR:TRF 1 12281
        Y54F10AR:Dust 1 12281
        Y54F10AR:inverted 1 12281
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: Y71H2B 12082
    Overlap_left: Y54F10AM
    Clone_left_end: Y54F10AR 1
    Clone_right_end: Y54F10AR 12281
  DB_info: Database: EMBL NDB_AC FO081807
        NDB_ID _AC024814
        NDB_SV FO081807.1
    Secondary_accession: AC024814
    DB_remark: The 5' clone is Y54F10AM, 200 bp overlap; the 3' clone is Y71H2B, 200 bp overlap.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Ryan E
      Courtney L
    From_laboratory: RW
    Date: 10 Dec 1999 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: Y54F10AR
  Properties: Genomic_canonical
    Checksum: MD5: d70d06bb046edf89559ecd1c7727fb35
    Status: Finished
      Submitted: 10 Dec 1999 00:00:00
  Map: Sequence-III
  Interpolated_map_position: III -12.0787
  Method: Genomic_canonical