WormBase Tree Display for CDS: Y54G2A.23
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Y54G2A.23 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y54G2A | |||
Structure | Source_exons | 1 | 70 | |||
133 | 257 | |||||
330 | 474 | |||||
542 | 708 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q9N3B0 | ||
UniProt | UniProtAcc | Q9N3B0 | ||||
UniProt_GCRP | UniProtAcc | Q9N3B0 | ||||
AlphaFold | entry | Q9N3B0 | ||||
NCBI_protein | GI_number | GI:351051342 | ||||
TREEFAM | TREEFAM_ID | TF314252 | ||||
Protein_id | CHROMOSOME_IV | CCD83510 | 1 | |||
DB_remark | MANF-1 protein; contains similarity to Pfam domains PF10208 (ARMET, C-terminal), PF20145 (ARMET, N-terminal); contains similarity to Interpro domains IPR019345 (ARMET, C-terminal), IPR045332 (ARMET, N-terminal), IPR045333 (ARMET-like), IPR036361 (SAP domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00021888 | ||||
Corresponding_transcript | Y54G2A.23.1 | |||||
Corresponding_protein | CE30049 | |||||
Corresponding_PCR_product | cenix:232-e12 | |||||
mv_Y54G2A.o | ||||||
sjj2_Y54G2A.23.1 | ||||||
Corresponding_oligo_set (12) | ||||||
Matching_cDNA (86) | ||||||
RNAi_result | WBRNAi00057455 | |||||
Microarray_results (12) | ||||||
Brief_identification | Mesencephalic astrocyte-derived neurotrophic factor homolog | Accession_evidence | UniProt | SP:Q9N3B0 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 12 Sep 2013 00:00:00 | WBPerson4025 | ||||
Remark | [010820 db] split Y54G2A.31 off this | Curator_confirmed | WBPerson1848 | |||
[011102 js] removed the last exon based on EST data - | Curator_confirmed | WBPerson615 | ||||
WBPerson1848 | ||||||
SL1 trans-spliced; see yk120c12.5 | ||||||
Associated_feature | WBsf005190 | |||||
Method | curated |