WormBase Tree Display for Sequence: Y55D5A
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| Y55D5A | DNA | Y55D5A | 86523 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00021915 | 13954 | 19695 | |
| WBGene00021918 | 21602 | 19623 | ||||
| WBGene00198018 | 83062 | 83001 | ||||
| WBGene00199239 | 83001 | 83062 | ||||
| WBGene00000898 | 72391 | 26059 | ||||
| WBGene00021917 | 7334 | 1796 | ||||
| WBGene00195489 | 5136 | 5198 | ||||
| WBGene00167539 | 79026 | 79046 | ||||
| WBGene00219761 | 69088 | 67086 | ||||
| WBGene00021919 | 78685 | 74138 | ||||
| CDS_child (226) | ||||||
| Transcript (20) | ||||||
| Transposon | WBTransposon00000548 | 68056 | 68143 | |||
| PCR_product | cenix:178-g5 | 18762 | 19658 | |||
| cenix:180-h9 | 75421 | 76202 | ||||
| cenix:190-f8 | 20363 | 20506 | ||||
| cenix:233-a6 | 2230 | 2504 | ||||
| cenix:238-a4 | 1278 | 1391 | ||||
| cenix:66-g11 | 32086 | 32925 | ||||
| mv_AAC47715 | 27466 | 60246 | ||||
| mv_G_YK4567 | 14017 | 19528 | ||||
| p_Y55D5A.5_93 | 60239 | 62010 | ||||
| p_Y55D5A.5_93_1 | 60239 | 62239 | ||||
| p_Y55D5A.5_93_2 | 60239 | 62274 | ||||
| sjj2_Y55D5A.1a | 18590 | 19654 | ||||
| sjj_Y55D5A_391.a | 75296 | 77437 | ||||
| sjj_Y55D5A_391.b | 43956 | 46241 | ||||
| sjj_Y55D5A_391.c | 83718 | 86146 | ||||
| sjj_Y55D5A_392.a | 31335 | 33191 | ||||
| sjj_Y55D5A_392.a_1 | 31335 | 33337 | ||||
| sjj_Y55D5A_392.b | 19721 | 21845 | ||||
| sjj_Y55D5A_392.c | 2107 | 4522 | ||||
| sjj_Y55D5A_392.d | 461 | 1520 | ||||
| sjj_Y55D5A_392.e | 14837 | 17136 | ||||
| sjj_Y55D5A_392.f | 18531 | 19561 | ||||
| Allele (2236) | ||||||
| Oligo_set | Aff_Y55D5A_391.A | 76376 | 74271 | |||
| Aff_Y55D5A_391.B | 44320 | 43721 | ||||
| Aff_Y55D5A_392.A | 31519 | 27464 | ||||
| Aff_Y55D5A_392.B | 21601 | 19823 | ||||
| Aff_Y55D5A_392.C | 3611 | 2222 | ||||
| Aff_Y55D5A_392.E | 15066 | 17586 | ||||
| Aff_Y55D5A_392.F | 17633 | 19530 | ||||
| Feature_object (403) | ||||||
| Feature_data | Y55D5A:Polysome | 1 | 86523 | |||
| Y55D5A:TranscriptionallyActiveRegion | 1 | 86523 | ||||
| Y55D5A:ChIPSeqTF | 1 | 86523 | ||||
| Y55D5A:TRF | 1 | 86523 | ||||
| Y55D5A:Dust | 1 | 86523 | ||||
| Y55D5A:inverted | 1 | 86523 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | H06I04 | 84024 | ||||
| Overlap_left | H05C05 | |||||
| Clone_left_end | Y55D5A | 1 | ||||
| Clone_right_end | H05C05 | 200 | ||||
| Y55D5A | 86523 | |||||
| DB_info | Database | EMBL | NDB_AC | FO081525 | ||
| NDB_ID | _AC084196 | |||||
| NDB_SV | FO081525.2 | |||||
| Secondary_accession | AC084196 | |||||
| DB_remark | The 5' clone is H05C05, 800 bp overlap; the 3' clone is H06I04, 2500 bp overlap. | |||||
| [121025] Sequence correction: SNP 0 bases @ 12154 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Cotton M | ||||
| Graves T | ||||||
| From_laboratory | RW | |||||
| Date | 09 Mar 2000 00:00:00 | |||||
| Date_directory | ||||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | Y55D5A | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 34baa5e6bf740eaeab55b29b9ae1a821 | ||||
| Status | Finished | |||||
| Submitted | 09 Mar 2000 00:00:00 | |||||
| Map | Sequence-III | |||||
| Interpolated_map_position | III | -8.06623 | ||||
| Method | Genomic_canonical |
