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WormBase Tree Display for Sequence: Y59A8B

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Name Class

Y59A8BDNAY59A8B174664
SMapS_childGene_childWBGene000133562239522595
WBGene0001334392925112799
WBGene00201758150402150486
WBGene0001493237763847
WBGene00044794125843124224
WBGene000133527181465793
WBGene00305845114016120326
WBGene000053508466282859
WBGene0001493132073277
WBGene002196248202682549
WBGene00013348155646152848
WBGene00200320148615148702
WBGene00305844144094143641
WBGene0001493021402210
WBGene00014928797867
WBGene000133545052838709
WBGene00305847114016118130
WBGene00001080196396728
WBGene00195640107967108031
WBGene00198408108031107967
WBGene00013350157569168564
WBGene0001459515241592
WBGene000133517767678317
WBGene00305846114016128711
WBGene003058421848818076
WBGene0020146982438166
WBGene00007062126415131154
WBGene00013349156670156155
WBGene002008649508395142
WBGene000133553729324332
WBGene00013345136753132609
WBGene0001492912401311
WBGene00197676110874110923
WBGene00219233107178107287
WBGene00199980147363147419
WBGene0020234481668243
WBGene000454598128380426
WBGene00305843135944135542
WBGene000055119046088350
WBGene00200466110923110874
WBGene000053518777285087
WBGene00200676150486150402
WBGene00013344114017123164
WBGene00013347152403140450
WBGene001964489514695083
WBGene000133535670664992
CDS_child (649)
Transcript (63)
PseudogeneY59A8B.59046088350
Y59A8B.t1797867
Y59A8B.t212401311
Y59A8B.t421402210
Y59A8B.t532073277
Y59A8B.t637763847
TransposonWBTransposon000005512009020219
WBTransposon000004127526875419
Nongenomicyk175d9101103112706
yk329c91314608
PCR_product (70)
Allele (4288)
Oligo_set (15)
Feature_object (1047)
Feature_dataY59A8B:Polysome1174664
Y59A8B:TranscriptionallyActiveRegion1174664
Y59A8B:ChIPSeqTF1174664
Y59A8B:TRF1174664
Y59A8B:Dust1174664
Y59A8B:inverted1174664
Homol_data (20)
StructureFromSourceCHROMOSOME_V
Overlap_rightY37H2A174564
Overlap_leftE01B7
Clone_left_endY37H2174564
Y59A8B1
Clone_right_endE01B7101
TY814360
Y59A8B174664
DB_infoDatabaseEMBLNDB_ACAL132898
NDB_SVAL132898.3
DB_remark[121025] Sequence correction: SNP 0 bases @ 20732
[121025] Sequence correction WBsf268072 : Insertion A1 bases from @ 46427
[121025] Sequence correction WBsf268099 : Insertion C1 bases from @ 59638
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorSulston JE
From_laboratoryHX
Date_directory000720
SpeciesCaenorhabditis elegans
StrainWBStrain00000001
VisibleCloneY59A8B
PropertiesGenomic_canonical
ChecksumMD53e8561344dd8ac169390b85a2517279c
StatusFinished24 Jul 2000 00:00:00
Submitted23 Oct 2000 00:00:00
Annotated27 Jul 2000 00:00:00
MapSequence-VEndsLeft10443
Right10485
Interpolated_map_positionV13.4562
Assembly_tagsClone right end104101E01B7
1436014363TY8
101104E01B7
Finished Left41Y59A8B
14Y59A8B
annotation3155931879First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - single clone in inverted repeat
First select a Feature -[ ] Unsure[x] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[x] Single clone region[ ] Forced join[ ] OtherAdd a comment here -Part of an inverted repeat.Data edited to reverse sequence. Possible base discrepancies where there are base differences in the reverse sequence.
3455034551First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - single clone in inverted repeat
4142341563First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - inverted repeat
First select a Feature -
[ ] Unsure
[x] Misc_feature
Then select the text for the note(s) -
[ ] Tandem repeat
[x] Single clone region
[ ] Forced join
[ ] Other
Add a comment here -
Part of an inverted repeat
130979130982
First select a Feature -
[ ] Unsure
[x] Misc_feature
Then select the text for the note(s) -
[ ] Tandem repeat
[ ] Single clone region
[ ] Forced join
[x] Other
Add a comment here -
4 Ts missing from one clone
7475374817
First select a Feature -
[ ] Unsure
[x] Misc_feature
Then select the text for the note(s) -
[ ] Tandem repeat
[ ] Single clone region
[ ] Forced join
[x] Other
Add a comment here -
primer chemistry only over this region
133535133548
First select a Feature -
[ ] Unsure
[x] Misc_feature
Then select the text for the note(s) -
[ ] Tandem repeat
[x] Single clone region
[ ] Forced join
[ ] Other
Add a comment here -
151087151092
First select a Feature -
[ ] Unsure
[x] Misc_feature
Then select the text for the note(s) -
[ ] Tandem repeat
[x] Single clone region
[ ] Forced join
[ ] Other
Add a comment here -
8770787704G missing in two templates
114646114603First select a Feature - [x] Unsure [ ] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [ ] Other Add a comment here -
172829172833First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - single clone in inverted repeat
8770487707G missing in two templates
172830172834First select a Feature -[ ] Unsure[x] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[x] Single clone region[ ] Forced join[ ] OtherAdd a comment here -single clone in loop between inverted repeatPrimer chemistry onlyPossible base discrepancy
Clone left end174568174563Y37H2
174569174564Y37H2
Finished Right174660174663Y59A8B
174664174661Y59A8B
MethodGenomic_canonical