WormBase Tree Display for CDS: ZC518.3a
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| ZC518.3a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZC518 | ||
| Structure | Source_exons | 1 | 20 | ||
| 978 | 1177 | ||||
| 1226 | 1329 | ||||
| 1816 | 2074 | ||||
| 6334 | 6402 | ||||
| 6723 | 7187 | ||||
| 7237 | 7764 | ||||
| 8390 | 8565 | ||||
| DB_info | Database | KEGG | KEGG_id | 3.1.13.4 | |
| TrEMBL | UniProtAcc | G5EE09 | |||
| UniProt | UniProtAcc | G5EE09 | |||
| AlphaFold | entry | G5EE09 | |||
| NCBI_protein | GI_number | GI:22859086 | |||
| Protein_id | CHROMOSOME_IV | CAB54511 | 2 | ||
| DB_remark | CCR-4 protein; contains similarity to Pfam domains PF03372 (Endonuclease/Exonuclease/phosphatase family), PF13855 (Leucine rich repeat); contains similarity to Interpro domains IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype), IPR005135 (Endonuclease/exonuclease/phosphatase), IPR032675 (Leucine-rich repeat domain superfamily), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | NDB | C50443 | ||
| Inferred_automatically | transcript_builder | ||||
| Visible (12) | |||||
| Method | curated |
