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WormBase Tree Display for CDS: ZK1010.7

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Name Class

ZK1010.7EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZK1010
StructureSource_exons1162
215758
8241014
DB_infoDatabaseTrEMBLUniProtAccO18286
UniProtUniProtAccO18286
UniProt_GCRPUniProtAccO18286
AlphaFoldentryO18286
NCBI_proteinGI_numberGI:3881480
Protein_idCHROMOSOME_IIICAB049731
DB_remarkCOL-97 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000672
Corresponding_transcriptZK1010.7.1
Corresponding_proteinCE15507
Corresponding_PCR_productTH:321G10
cenix:321-g10
mv_ZK1010.7
sjj_ZK1010.7
smd_ZK1010.7
Corresponding_oligo_set (17)
Matching_cDNA (43)
RNAi_resultWBRNAi00027024
WBRNAi00021770
WBRNAi00059040
WBRNAi00027554
WBRNAi00006091
WBRNAi00038111
Microarray_results (19)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:O18286
RNASeq_FPKM (74)
Associated_featureWBsf019689
Methodcurated