WormBase Tree Display for CDS: ZK1010.7
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ZK1010.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK1010 | |||
Structure | Source_exons | 1 | 162 | |||
215 | 758 | |||||
824 | 1014 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O18286 | ||
UniProt | UniProtAcc | O18286 | ||||
UniProt_GCRP | UniProtAcc | O18286 | ||||
AlphaFold | entry | O18286 | ||||
NCBI_protein | GI_number | GI:3881480 | ||||
Protein_id | CHROMOSOME_III | CAB04973 | 1 | |||
DB_remark | COL-97 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000672 | ||||
Corresponding_transcript | ZK1010.7.1 | |||||
Corresponding_protein | CE15507 | |||||
Corresponding_PCR_product | TH:321G10 | |||||
cenix:321-g10 | ||||||
mv_ZK1010.7 | ||||||
sjj_ZK1010.7 | ||||||
smd_ZK1010.7 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (43) | ||||||
RNAi_result | WBRNAi00027024 | |||||
WBRNAi00021770 | ||||||
WBRNAi00059040 | ||||||
WBRNAi00027554 | ||||||
WBRNAi00006091 | ||||||
WBRNAi00038111 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:O18286 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf019689 | |||||
Method | curated |