WormBase Tree Display for CDS: ZK154.3
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ZK154.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK154 | |||
Structure | Source_exons | 1 | 57 | |||
113 | 240 | |||||
362 | 1016 | |||||
1064 | 1382 | |||||
1430 | 1596 | |||||
DB_info | Database | SwissProt | UniProtAcc | P12456 | ||
UniProt | UniProtAcc | P12456 | ||||
UniProt_GCRP | UniProtAcc | P12456 | ||||
AlphaFold | entry | P12456 | ||||
NCBI_protein | GI_number | GI:351059957 | ||||
Protein_id | CHROMOSOME_X | CCD67558 | 1 | |||
DB_remark | MEC-7 protein; contains similarity to Pfam domains PF00091 (Tubulin/FtsZ family, GTPase domain), PF03953 (Tubulin C-terminal domain); contains similarity to Interpro domains IPR000217 (Tubulin), IPR003008 (Tubulin/FtsZ, GTPase domain), IPR023123 (Tubulin, C-terminal), IPR018316 (Tubulin/FtsZ, 2-layer sandwich domain), IPR002453 (Beta tubulin), IPR037103 (Tubulin/FtsZ-like, C-terminal domain), IPR036525 (Tubulin/FtsZ, GTPase domain superfamily), IPR008280 (Tubulin/FtsZ, C-terminal) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00003171 | ||||
Corresponding_transcript | ZK154.3.1 | |||||
Corresponding_protein | CE15257 | |||||
Corresponding_PCR_product | cenix:217-d8 | |||||
mv_CAA33320 | ||||||
sjj_ZK154.3 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (83) | ||||||
RNAi_result (18) | ||||||
Microarray_results (18) | ||||||
Brief_identification | Tubulin beta-1 chain | Accession_evidence | UniProt | SP:P12456 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |