WormBase Tree Display for CDS: CBG05555f
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CBG05555f | SMap | S_parent | Sequence | cb25.fpc0129 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 95 | ||
1355 | 1429 | ||||
1478 | 1526 | ||||
2635 | 2886 | ||||
3749 | 4358 | ||||
4588 | 4902 | ||||
4946 | 5098 | ||||
5146 | 5529 | ||||
5574 | 5979 | ||||
6025 | 6248 | ||||
6499 | 6662 | ||||
6860 | 6978 | ||||
8081 | 8648 | ||||
9624 | 10200 | ||||
10841 | 10942 | ||||
11091 | 11231 | ||||
11864 | 12024 | ||||
12497 | 12535 | ||||
DB_info | DB_remark | CBR-UNC-80 protein; contains similarity to Pfam domain PF15778 (UNC80 N-terminal); contains similarity to Interpro domain IPR031542 (Cation channel complex component UNC80, N-terminal) | |||
Origin | From_laboratory | CB | |||
Species | Caenorhabditis briggsae | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Curator_confirmed | WBPerson4025 | |||
Visible | Gene | WBGene00027983 | |||
Corresponding_transcript | CBG05555f.1 | ||||
CBG05555f.2 | |||||
CBG05555f.3 | |||||
Corresponding_protein | CBP42857 | ||||
Matching_cDNA | briggsae_GG3244|c2_g2_i2 | Inferred_automatically | transcript_builder.pl | ||
briggsae_GG3244|c2_g2_i6 | Inferred_automatically | transcript_builder.pl | |||
briggsae_GG3244|c2_g2_i4 | Inferred_automatically | transcript_builder.pl | |||
RNASeq_FPKM (9) | |||||
Last_reviewed | 31 Aug 2016 10:21:23 | WBPerson4025 | |||
Remark | [160826 gw3] This structure has been created based on the Trinity model 'briggsae_GG3244|c2_g2_i5-chrV-1b.extended'. | Curator_confirmed | WBPerson4025 | ||
Method | curated |