WormBase Tree Display for CDS: M79.1f
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M79.1f | SMap | S_parent | Sequence | M79 | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | KEGG | KEGG_id | 2.7.10.2 | ||
TrEMBL | UniProtAcc | A0A8S4QC30 | ||||
UniProt | UniProtAcc | A0A8S4QC30 | ||||
AlphaFold | entry | A0A8S4QC30 | ||||
Protein_id | CHROMOSOME_X | CAH2193336 | 1 | |||
DB_remark | ABL-1 protein; contains similarity to Pfam domains PF00017 (SH2 domain), PF00018 (SH3 domain), PF07714 (Protein tyrosine and serine/threonine kinase), PF08919 (F-actin binding); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR036860 (SH2 domain superfamily), IPR036028 (SH3-like domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR015015 (F-actin binding), IPR001452 (SH3 domain), IPR000980 (SH2 domain), IPR020635 (Tyrosine-protein kinase, catalytic domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson51134 | ||||
Feature_evidence | WBsf131739 | |||||
From_analysis | RNASeq_splice | |||||
Visible | Gene | WBGene00000018 | ||||
Corresponding_transcript | M79.1f.1 | |||||
Corresponding_protein | CE54481 | |||||
Corresponding_PCR_product | cenix:72-a6 | |||||
mv_M79.1a | ||||||
mv_M79.1c | ||||||
sjj_M79.1 | ||||||
Corresponding_oligo_set (14) | ||||||
RNAi_result (16) | ||||||
Microarray_results (22) | ||||||
Brief_identification | Tyrosine-protein kinase | Accession_evidence | UniProt | TR:A0A8S4QC30 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 29 Sep 2021 14:58:08 | WBPerson51134 | ||||
Remark | [210929 skd] This isoform has been created based on SL1 and RNASeq_splice_high_qual data. Notice alternative splice site at 3' end of exon9. | Curator_confirmed | WBPerson51134 | |||
Feature_evidence | WBsf131739 | |||||
From_analysis | RNASeq_splice | |||||
Method | curated |