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WormBase Tree Display for CDS: C01B7.6

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Name Class

C01B7.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC01B7
StructureSource_exons (15)
DB_infoDatabaseKEGGKEGG_id2.3.2.33
SwissProtUniProtAccQ17551
UniProtUniProtAccQ17551
UniProt_GCRPUniProtAccQ17551
AlphaFoldentryQ17551
NCBI_proteinGI_numberGI:351018187
TREEFAMTREEFAM_IDTF313151
Protein_idCHROMOSOME_VCCD620871
DB_remarkRPM-1 protein; contains similarity to Pfam domains PF00415 (Regulator of chromosome condensation (RCC1) repeat), PF03256 (Anaphase-promoting complex, subunit 10 (APC10)), PF08005 (PHR domain), PF13540 (Regulator of chromosome condensation (RCC1) repeat); contains similarity to Interpro domains IPR004939 (APC10/DOC domain), IPR001841 (Zinc finger, RING-type), IPR038648 (PHR domain superfamily), IPR012983 (PHR), IPR009091 (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR008979 (Galactose-binding-like domain superfamily), IPR000408 (Regulator of chromosome condensation, RCC1), IPR000315 (B-box-type zinc finger)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00004457
Corresponding_transcriptC01B7.6.1
Corresponding_proteinCE06730
Corresponding_PCR_productcenix:159-a12
cenix:39-e7
mv_C01B7.6
sjj2_C01B7.6
sjj_C01B7.6
Corresponding_oligo_set (28)
Matching_cDNA (33)
RNAi_result (11)
Microarray_results (28)
Brief_identificationE3 ubiquitin-protein ligase rpm-1Accession_evidenceUniProtSP:Q17551
RNASeq_FPKM (74)
Methodcurated