WormBase Tree Display for CDS: CBG06881c
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| CBG06881c | SMap | S_parent | Sequence | cb25.fpc0201 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 153 | ||
| 200 | 278 | ||||
| 328 | 425 | ||||
| 472 | 600 | ||||
| 856 | 1004 | ||||
| 1859 | 2068 | ||||
| 2115 | 3372 | ||||
| 3484 | 3606 | ||||
| 4186 | 4577 | ||||
| 4632 | 4737 | ||||
| DB_info | DB_remark | CBR-UNC-32 protein; contains similarity to Pfam domain PF01496 (V-type ATPase 116kDa subunit family); contains similarity to Interpro domains IPR002490 (V-type ATPase, V0 complex, 116kDa subunit family), IPR026028 (ATPase, V0 complex, subunit 116kDa, eukaryotic) | |||
| Origin | From_laboratory | CB | |||
| Species | Caenorhabditis briggsae | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Curator_confirmed | WBPerson4025 | |||
| Visible | Gene | WBGene00029076 | |||
| Corresponding_transcript | CBG06881c.1 | ||||
| Corresponding_protein | CBP38733 | ||||
| Corresponding_oligo_set | GPL8303_CB6_WBGene00029076_A | ||||
| GPL14143_CBG06881_2731-2790_0.880_19_A | |||||
| Matching_cDNA | briggsae_GG5435|c4_g1_i7 | Inferred_automatically | transcript_builder.pl | ||
| Microarray_results (2) | |||||
| RNASeq_FPKM (9) | |||||
| Last_reviewed | 31 Aug 2016 10:21:19 | WBPerson4025 | |||
| Remark | [160826 gw3] This structure has been created based on the Trinity model 'briggsae_GG5435|c4_g1_i10-chrIII-1.extended'. | Curator_confirmed | WBPerson4025 | ||
| Method | curated |
