WormBase Tree Display for CDS: CJA03272b
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CJA03272b | SMap | S_parent | Sequence | Cjap.Contig17138 |
---|---|---|---|---|
Structure | Source_exons | 1 | 120 | |
174 | 256 | |||
302 | 434 | |||
880 | 1029 | |||
1069 | 1113 | |||
DB_info | DB_remark | CJP-CPN-1 protein; contains similarity to Pfam domain PF00307 (Calponin homology (CH) domain); contains similarity to Interpro domains IPR036872 (CH domain superfamily), IPR001715 (Calponin homology domain), IPR003096 (Smooth muscle protein/calponin) | ||
Origin | From_laboratory | RW | ||
Species | Caenorhabditis japonica | |||
Properties | Coding | CDS | ||
Prediction_status | Partially_confirmed | |||
Isoform | ||||
Visible | Gene | WBGene00122476 | ||
Corresponding_transcript | CJA03272b.1 | |||
Corresponding_protein | JA44931 | |||
Corresponding_oligo_set | GPL14145_CJA03272_213-272_0.857_11_B | |||
GPL14145_CJA03272_283-342_0.816_15_C | ||||
Microarray_results | GPL14145_CJA03272_213-272_0.857_11_B | |||
GPL14145_CJA03272_283-342_0.816_15_C | ||||
RNASeq_FPKM (4) | ||||
Remark | based on Augustus prediction Cjap.Contig17138.g14139.t2[100726 mh6] | |||
Method | curated |