WormBase Tree Display for Gene: WBGene00122476

WBGene00122476 SMap: S_parent: Sequence: Cjap.Contig17138
  Identity: Version: 2
    Name: CGC_name: Cjp-cpn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA03272
      Molecular_name: CJA03272a
        CJA03272a.1
        JA53764
        CJA03272b
        JA44931
        CJA03272b.1
      Public_name: Cjp-cpn-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cpn-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.096115 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        0.192231 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        37.4332 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        38.9928 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        49.5701 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        50.0906 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        50.6111 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        53.2281 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        53.5033 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        53.5598 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 0.192231 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        23.0506 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (34)
    Paralog: WBGene00128399 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00178953 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123334 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00131242 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129648 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131525 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136626 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA03272a
      CJA03272b
    Corresponding_transcript: CJA03272a.1
      CJA03272b.1
    Other_sequence (41)
  Experimental_info: Microarray_results: GPL14145_CJA03272_213-272_0.857_11_B
      GPL14145_CJA03272_283-342_0.816_15_C
  Method: Gene