CRE02845 | SMap | S_parent | Sequence | Crem_Contig10 |
| Structure | Source_exons | 1 | 735 |
| | | 1411 | 1482 |
| | | 1708 | 2205 |
| | | 2791 | 4052 |
| | | 4383 | 4977 |
| DB_info | DB_remark | CRE-UNC-71 protein; contains similarity to Pfam domains PF00200 (Disintegrin), PF01421 (Reprolysin (M12B) family zinc metalloprotease), PF01562 (Reprolysin family propeptide), PF07974 (EGF-like domain), PF08516 (ADAM cysteine-rich); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR036436 (Disintegrin domain superfamily), IPR002870 (Peptidase M12B, propeptide), IPR006586 (ADAM, cysteine-rich domain), IPR001762 (Disintegrin domain), IPR001590 (Peptidase M12B, ADAM/reprolysin), IPR013111 (EGF-like domain, extracellular) |
| Origin | From_laboratory | RW |
| | Species | Caenorhabditis remanei |
| Properties | Coding | CDS |
| | | Prediction_status | Partially_confirmed |
| Visible | Gene | WBGene00063439 |
| | Corresponding_transcript | CRE02845.1 |
| | Corresponding_protein | RP38169 |
| | Corresponding_oligo_set | GPL14146_CRE02845_1859-1918_0.865_36_C |
| | | GPL14146_CRE02845_2329-2388_0.898_19_B |
| | | GPL14146_CRE02845_2433-2492_0.912_12_A |
| | Matching_cDNA | DY526222 | Inferred_automatically | transcript_builder.pl |
| | Microarray_results | GPL14146_CRE02845_1859-1918_0.865_36_C |
| | | GPL14146_CRE02845_2329-2388_0.898_19_B |
| | | GPL14146_CRE02845_2433-2492_0.912_12_A |
| | RNASeq_FPKM | WBls:0000004 | 58.9107 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881 |
| | | | 59.0956 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882 |
| | | WBls:0000024 | 11.0151 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311803 |
| | | | 11.5626 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799 |
| | | | 3.53384 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017 |
| | | | 3.58843 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016 |
| | | | 3.75382 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018 |
| | | | 3.85668 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019 |
| | | | 4.89734 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012 |
| | | | 5.05667 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013 |
| | | | 5.48093 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995 |
| | | | 5.5148 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001 |
| | | | 5.59429 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998 |
| | | | 5.60481 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999 |
| | | | 5.64212 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006 |
| | | | 5.65202 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991 |
| | | | 5.67197 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990 |
| | | | 5.74617 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002 |
| | | | 5.74636 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988 |
| | | | 5.76478 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000 |
| | | | 5.77077 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015 |
| | | | 5.85558 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993 |
| | | | 5.91803 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996 |
| | | | 5.99919 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994 |
| | | | 6.08463 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021 |
| | | | 6.16793 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003 |
| | | | 6.1698 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008 |
| | | | 6.2972 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798 |
| | | | 6.32758 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007 |
| | | | 6.46672 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989 |
| | | | 6.69546 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014 |
| | | | 6.78225 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801 |
| | | | 6.8553 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010 |
| | | | 6.87856 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011 |
| | | | 7.08235 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004 |
| | | | 7.46978 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020 |
| | | | 7.62809 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005 |
| | | | 7.69798 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992 |
| | | | 8.06792 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009 |
| | | | 8.19921 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997 |
| | | | 8.35318 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987 |
| | | | 8.41564 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986 |
| | | | 8.59748 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800 |
| | | | 9.37206 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802 |
| | | | 3.31827 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481 |
| | | | 4.57285 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488 |
| | | | 4.7494 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482 |
| | | | 5.84797 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484 |
| | | | 5.89269 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486 |
| | | | 6.01179 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490 |
| | | | 6.2895 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479 |
| | | | 6.3919 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483 |
| | | | 6.51431 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489 |
| | | | 6.69213 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485 |
| | | | 6.79606 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480 |
| | | | 7.35885 | From_analysis | RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487 |
| | | WBls:0000027 | 10.2185 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884 |
| | | | 10.8495 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885 |
| | | | 4.08516 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082 |
| | | | 9.68789 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883 |
| | | WBls:0000038 | 1.34678 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083 |
| | | | 2.80309 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880 |
| | | | 3.72204 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879 |
| | | WBls:0000041 | 3.04707 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975 |
| | | | 3.27581 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976 |
| | | | 34.4841 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973 |
| | | | 3.65953 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974 |
| | | | 38.2854 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972 |
| | | | 40.8794 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971 |
| | | WBls:0000063 | 3.49395 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894 |
| | | | 3.52162 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891 |
| | | | 4.02582 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895 |
| | | | 4.32936 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893 |
| | | | 5.48592 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888 |
| | | | 5.89433 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887 |
| | | | 6.03934 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889 |
| | | | 7.79838 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890 |
| | | | 8.5004 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886 |
| | | | 8.79864 | From_analysis | RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892 |
| Method | curated |