WormBase Tree Display for CDS: CRE02845
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CRE02845 | SMap | S_parent | Sequence | Crem_Contig10 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 735 | ||
1411 | 1482 | ||||
1708 | 2205 | ||||
2791 | 4052 | ||||
4383 | 4977 | ||||
DB_info | DB_remark | CRE-UNC-71 protein; contains similarity to Pfam domains PF00200 (Disintegrin), PF01421 (Reprolysin (M12B) family zinc metalloprotease), PF01562 (Reprolysin family propeptide), PF07974 (EGF-like domain), PF08516 (ADAM cysteine-rich); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR036436 (Disintegrin domain superfamily), IPR002870 (Peptidase M12B, propeptide), IPR006586 (ADAM, cysteine-rich domain), IPR001762 (Disintegrin domain), IPR001590 (Peptidase M12B, ADAM/reprolysin), IPR013111 (EGF-like domain, extracellular) | |||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis remanei | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00063439 | |||
Corresponding_transcript | CRE02845.1 | ||||
Corresponding_protein | RP38169 | ||||
Corresponding_oligo_set | GPL14146_CRE02845_1859-1918_0.865_36_C | ||||
GPL14146_CRE02845_2329-2388_0.898_19_B | |||||
GPL14146_CRE02845_2433-2492_0.912_12_A | |||||
Matching_cDNA | DY526222 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results | GPL14146_CRE02845_1859-1918_0.865_36_C | ||||
GPL14146_CRE02845_2329-2388_0.898_19_B | |||||
GPL14146_CRE02845_2433-2492_0.912_12_A | |||||
RNASeq_FPKM (6) | |||||
Method | curated |